Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_3392 |
Symbol | |
ID | 8531810 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | - |
Start bp | 3729542 |
End bp | 3729934 |
Gene Length | 393 bp |
Protein Length | 130 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | putative prepilin peptidase dependent protein c precursor |
Protein accession | YP_003260737 |
Protein GI | 261822631 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.176023 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAACGGA ATAGCGCAGT GAACAACAGA TTCGTGAGTC ATCAATCCGG TTTTAGCCTA CCGGAAACGC TGGTGGCGGC GCTGCTGTTT GCCGTCTCGC TGATGGGATT GTTGCAATAT CACCAGATCT TACAGCAGTC ATTTCAGCAC CAGTGGCAGC AGCGTCAGGC CTGGCGGTTT GCGATGCAGC TGTTGGAGGC TTATGAAGCA GGCGTGCCGT ATCATCCGTC CGCTCCTGAT AATACTGCGT CTTTCTTGAG TAAAAACTGG CAGTTTAGTC TGTCAGAGCA GTTACAGCGC AACGAATGCC GTCAGGTAAC TGTTAGGGTC ATGACGCCAC GTCGCTATCA GGCTACACTG AACCGTTGGT TTTGCCCGTT ATCGCCTGTC TAG
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Protein sequence | MQRNSAVNNR FVSHQSGFSL PETLVAALLF AVSLMGLLQY HQILQQSFQH QWQQRQAWRF AMQLLEAYEA GVPYHPSAPD NTASFLSKNW QFSLSEQLQR NECRQVTVRV MTPRRYQATL NRWFCPLSPV
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