| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_3006 |
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| Symbol | |
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| ID | 8531412 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | + |
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| Start bp | 3271629 |
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| End bp | 3272768 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | |
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| Product | extracellular solute-binding protein family 1 |
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| Protein accession | YP_003260359 |
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| Protein GI | 261822253 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGGCAG ATACGACTCT CATTCAGGAG GAATCGATGT TTAACATAAA ACAGGTGGTC
GCATTCACGG CGCTAATGGC GACGGTAGCG AGCAGCTATG CGGCAGTAGA AGCAGATAAA
CGCCCGATTA ACGAGCTTTA TCAGAATGCA CTACGGGAAG GCGGTGTTGT GACCGTCTAC
GCAGGCGGCG ACACGCCGGG TCAGCAGGAT GGCATCAAAC AAGCGTTTGA AAAACGCTTT
CCAGGCATGA AGCTCAACGT GATTGTGGAT TACAGTAAAT TCCACGATGC CCGTATTGAT
AACCAGTTGG CGACGAATAC GCTGGTGCCG GATGTGGTAC AGCTACAAAC CTTGCAGGAT
TATCCGCGCT GGAAGAAAGA AGGCGTGTTG CTGAGTTACA AACCTATTGG CTGGGACAAA
GTGTATCCGG CGTTTAAAGA TAAAGACGGT GCCTGGACCG GCGTGTTTGT CGATGCGTTC
AGCAACGTGG TCAATACCAT GCTGATTGCC GAAAATGCCT GGCCGACAGA AGCCAATGAT
TACCTGCGTC CCGATCTGAA AGGCAGTATT GTCTTGACCT ACCCGAACGA TGACGATGCC
GTGCTGTTCT GGTTCAAGCA GGTCGTGGAT AAATACGGCT GGGAGTATGT TGCGAAGTTC
AAAGAGCAGA ACCCCGTTTA CGTGCGGGGT ACGCAGGCAC CAGCAGACGA TGTAGAAAGC
GGTAAATCTG CAGCGACATT CTCAACCGAC GGCGCGCTTG CTCCCGATCA GAATGCCAAT
TCCCGTTTTG TTCTGCCTAA AAACGATCCA TTCGTCTCTT GGGCACAGCG GGCGGCCATT
TTCAAACAGG CCAAACATCC GGAAAGCGCC AAGCTGTATC TGAGCTGGCT ATTGGATAAA
GAGACGCAGA GCAATGTCTG GTATATGTGG TCGGTCCGTA CTGACATTGC ACCGCCCGCT
GGCTATAAAC CTATCTGGGA ATATAAGAAT ACCAGCCCGC AAGCTTTTGC CGATTTCATG
AGCGATCGTG AGGCGGTAGA GTCATTCCGT GCCCAGATCG GGCTGTATCT TGGCGAAGTG
AAAGGTGAAC CCTCTCCGGG TCACTTAGGG CTGCATCCAA AGGAAGCACT ACCGCATTAA
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| Protein sequence | MSADTTLIQE ESMFNIKQVV AFTALMATVA SSYAAVEADK RPINELYQNA LREGGVVTVY
AGGDTPGQQD GIKQAFEKRF PGMKLNVIVD YSKFHDARID NQLATNTLVP DVVQLQTLQD
YPRWKKEGVL LSYKPIGWDK VYPAFKDKDG AWTGVFVDAF SNVVNTMLIA ENAWPTEAND
YLRPDLKGSI VLTYPNDDDA VLFWFKQVVD KYGWEYVAKF KEQNPVYVRG TQAPADDVES
GKSAATFSTD GALAPDQNAN SRFVLPKNDP FVSWAQRAAI FKQAKHPESA KLYLSWLLDK
ETQSNVWYMW SVRTDIAPPA GYKPIWEYKN TSPQAFADFM SDREAVESFR AQIGLYLGEV
KGEPSPGHLG LHPKEALPH
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