Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_2649 |
Symbol | |
ID | 8531050 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | - |
Start bp | 2897904 |
End bp | 2899460 |
Gene Length | 1557 bp |
Protein Length | 518 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | |
Product | ABC transporter related protein |
Protein accession | YP_003260012 |
Protein GI | 261821906 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.684281 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGGAAA AATCGGATGT CTCTCTACAA CCTAGCACGG CTTGTCGCCC CGAAATTGTG ATGGCAACCC GAGGCATCAC TATGCTGTTT CCCGGCACTA AAGCGTTGGA TAACGTCGAT TACAACGTTT ATCGCGGCAA GGTCAACGTG ATCATTGGCG AAAACGGAGC AGGAAAATCG ACGCTAATGA AGATTCTGGC AGGTGTACAG CAGCCTACGT CCGGCCAGAT CCTGCTAAAC GGCAACGTGG TGCATATCGC TGATACCCGC GATGCGACGG CGAAAGGCAT CGGCATGGTA CACCAGGAAC TTAACCTGTC CGAAAACCTG AGTGTGGCAG AGAACATCTT CCTGGGTCGG GAACTGCAAA AGGGCGTTAC GCCTATCGAT CATCTGGAAC AGGAGCGGAT TGCGGCGGAG CTGATGGCGC GTCTCGATCA GGCTATTTCG CCGCGTACCG AGGTCGCTAG CCTGAAAGTC GGCCAGCAGC AGCTAGTGGA AATTGCCAAG GCGCTGGCGG ATCGGGCCGA CATTTTGATT CTGGACGAAC CGACCTCCGC GCTAAGCAAA ACCGAAGTGG AGATTCTGTT TCGCGTGATC CGCGAGCTGA CTCGTCAGAA TGTTTCCATC ATCTACATTT CGCATCGGCT TGAAGAGCTA ATGGCGATTG GCGACTACAT CACCATCCTG CGTGACGGCT GTTTTCAGGC GGAAGCGGCG GTCAGCGACA TCGATGTGCC GTGGATCGTG CGGGAAATGC TCGGCGGTGA CCCTGTCACC AGCTTCCTGC ATTCGGACAG AACGTTCGGT GCGCCGATAT TGGAAGCGGA GCATCTTACC TGTCTCAATG ATGCCGGGCA TCAGGTGGTG AATGATGTCT CGCTGATGGT ACGTGAAGGG GAAATTGTCG GGATTTACGG GCTGATGGGG GCAGGGCGCA CGGAGCTGTT TGAGTGCTTG CTGGGCATTC AGAATGATTA TCTGGGCAAG ATTTATCTGG ATAGCAAACC GGTTAATCCG CGTCTTTCTA CCGCGCAGCG CATCCGCATG GGGATGAGCC TGGTGCCGGA AGATCGCAAA AAAACCGGCA TTTTTCCGCT CTCATCAGTC GCTTCTAATC TCACTATCGC CAGCCTATGG CGACGGTTGA AATACGGCAT GGCGATCTTC CAGCGACAGG AGCAAGAAGT GGTCGCCAGC GCGATTGGGC AGTTAGCGAT CAAAGTGTCT TCGCCCGAGG TGGAAATTCA GGCGCTCAGC GGTGGTAATC AGCAAAAAGT GGTCATTGGC CGCTCGCTGC TGACCAGCCC CAAGGTGCTG CTACTGGACG AACCGACGCG GGGCATCGAT GTAGGTGCCA AAGCCGACGT ATTTGAAATG ATGGTCGGGC TGTCCGAACA GGGCATCGGC GTGCTGTTTT CCACCTCGGA TCTGAAAGAA ATTATGGCGG TATCGGACCG TATTTTGGTG ATGTCGAATG GCAAACTGAC GGCGAATATC GTGCGTCAAT CGGCCAGCGA ATCGGCATTG GTTTCGGCAA GTGCACAAGG GTTCTGA
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Protein sequence | MMEKSDVSLQ PSTACRPEIV MATRGITMLF PGTKALDNVD YNVYRGKVNV IIGENGAGKS TLMKILAGVQ QPTSGQILLN GNVVHIADTR DATAKGIGMV HQELNLSENL SVAENIFLGR ELQKGVTPID HLEQERIAAE LMARLDQAIS PRTEVASLKV GQQQLVEIAK ALADRADILI LDEPTSALSK TEVEILFRVI RELTRQNVSI IYISHRLEEL MAIGDYITIL RDGCFQAEAA VSDIDVPWIV REMLGGDPVT SFLHSDRTFG APILEAEHLT CLNDAGHQVV NDVSLMVREG EIVGIYGLMG AGRTELFECL LGIQNDYLGK IYLDSKPVNP RLSTAQRIRM GMSLVPEDRK KTGIFPLSSV ASNLTIASLW RRLKYGMAIF QRQEQEVVAS AIGQLAIKVS SPEVEIQALS GGNQQKVVIG RSLLTSPKVL LLDEPTRGID VGAKADVFEM MVGLSEQGIG VLFSTSDLKE IMAVSDRILV MSNGKLTANI VRQSASESAL VSASAQGF
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