Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_2559 |
Symbol | |
ID | 8530960 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | - |
Start bp | 2792671 |
End bp | 2793210 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | transcriptional regulator, MarR family |
Protein accession | YP_003259926 |
Protein GI | 261821820 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.352753 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAAGTC AAACCAGCGA GTACGATGCG GTAGATGTCA TTCTTGAACA GTGGCGGCGC GAGCGACCTG ATTTGGATGC CAGCCCGATG GGGCCGATTG GACGCCTCAG ACGATGTGCT GTGCTCATGG ATCAGCGTCT GGAATCCTGC TTTTCCAAAT TCGATCTGAG CAGTTGGGAG TTTGATATGC TGGCTACGCT GCGGCGTGCG GGTGCGCCGT ACTGTCTGAG TCCAACCGAT TTGTTCTCCA CATTAATGGT GACGTCAGGA ACGATGACCC ACCGGCTCAA GCGGCTTGAA ATCCGAGGAT TTATCGAACG CGTGCAGAAC GAACAGGATG CCCGTAGTAC GCTGGTACAA CTGACCAGTA CGGGGCTTGA GCTGATTAAT CGCGCCGTCG AAGCGCATAT TGAGAACGAG CGGCAGGTGC TATCTGCGCT ATCTACGGAT GTGCTGGCTG CACTGGATGC CAATCTCGCC ACGCTATTGC GAACGTTGGA AAGTCACACT GGGCCTGCTG TACCTAAGGA GACAAACTAA
|
Protein sequence | MKSQTSEYDA VDVILEQWRR ERPDLDASPM GPIGRLRRCA VLMDQRLESC FSKFDLSSWE FDMLATLRRA GAPYCLSPTD LFSTLMVTSG TMTHRLKRLE IRGFIERVQN EQDARSTLVQ LTSTGLELIN RAVEAHIENE RQVLSALSTD VLAALDANLA TLLRTLESHT GPAVPKETN
|
| |