| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_1822 |
|---|
| Symbol | |
|---|
| ID | 8530220 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | + |
|---|
| Start bp | 1979701 |
|---|
| End bp | 1980636 |
|---|
| Gene Length | 936 bp |
|---|
| Protein Length | 311 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | |
|---|
| Product | transcriptional regulator, AraC family |
|---|
| Protein accession | YP_003259212 |
|---|
| Protein GI | 261821106 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAGAC AGCGACAGAG GCGAAGTGAA AAACCAGCAG GCGATCGATG CTGTGCGAAT
GAGGTTGACA TCTCTGGTTC ACGCCGCACT TTGCCAGATG ACATCGGTGA ATGCTGGTCG
GATTTCAGCC GTATTGATGC CGGCCTGTCG TTAGCTCGTT CACAATATCG CCCACGTCGT
GCATGGGTGG AGGAAACGCA GAACCCACAT TCACAGCCAA TGCTGGTCAT GACGTTTGCG
CTGGCAGGGG AGTCGACCTA TTGCGATAGC AGCGGATCAC AGGTCTGGTT TCGTGAGCAA
CATGTCACTA TCACGGCGTT TGGCTCCTGT GTGGGCGAAC GCCGTTATCA GGCTCAGCAG
CATGTCGATC AGTTACGGCT GCTGGTGGAG AAAACGGCGG CGGCACGTTA TTTTGGTTTA
GCCTGTTCGG AACAACTATT CAGTGGCGAT GACGTGCGGC TGTACGCGTT TACATCGGTA
TCTGCGGCCA GTCAGATTCA TGTCAATGCG CTGTGTAGCG ACGCCGACCC GCTGAATCGC
CATATTCATG CGTTAAGCCT GCTGTCACAG TATCGGTATC TCCTGCAACC GAAAGACAGG
CGTGACGCTA TTCATCCACA AGAGCGAGAG CTGTTGGAGC AGGTATGTTG CTGGATGCGG
GAACATCTGC CGGAACCGCT GACGCTGGCT TGCATTGCGG CTCAGGCGGG CATGAGTGAA
TCCCGGCTCA AACTTGGGTT TCACCGCTGT TTCGCGACTA CACCGGGGCA GATGCTATTA
CGGATGCGGA TGGAACGGGC GCACCAGCTA TTGGAGCTGG GGTTTCAGGT AGCGCAGACG
GCCTGGCAAG TCGGCTATCG GCATCCTGCT AATTTCAGCC TGGCATTTAC GCGCTATTTC
AACCGTAATC CGAAAATGAT TGCGGCGCGT AAGTAA
|
|---|
| Protein sequence | MQRQRQRRSE KPAGDRCCAN EVDISGSRRT LPDDIGECWS DFSRIDAGLS LARSQYRPRR
AWVEETQNPH SQPMLVMTFA LAGESTYCDS SGSQVWFREQ HVTITAFGSC VGERRYQAQQ
HVDQLRLLVE KTAAARYFGL ACSEQLFSGD DVRLYAFTSV SAASQIHVNA LCSDADPLNR
HIHALSLLSQ YRYLLQPKDR RDAIHPQERE LLEQVCCWMR EHLPEPLTLA CIAAQAGMSE
SRLKLGFHRC FATTPGQMLL RMRMERAHQL LELGFQVAQT AWQVGYRHPA NFSLAFTRYF
NRNPKMIAAR K
|
|---|
| |