| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_1668 |
|---|
| Symbol | |
|---|
| ID | 8530063 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | - |
|---|
| Start bp | 1806211 |
|---|
| End bp | 1807137 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | |
|---|
| Product | transcriptional regulator, LysR family |
|---|
| Protein accession | YP_003259065 |
|---|
| Protein GI | 261820959 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.239871 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGGATAC GCCACCTGCG ATATTTCTTG ATCGTAGCCG AAGAACAAAG CTTCACCCGC
GCGGCTGCCA GAGTCCATAT CGAACCATCC CCTCTGTCCC GAGCTATCAA GGAACTGGAG
AACTATCTAG GGGTTCAACT GCTTCATCGG TCCAAAGGCC GCATCAGGCT GACCTGGCCA
GGTGAAGTGT TTCGTGAAGA GGCTCAACGC ATCATTGCCT TTATAGAGAA CGCCCAAACA
CGAGTTAGCT CGGCCTCGCA AGGCTACCGT GGCCGATTGC GTATTGGGCT TGCAGACAGC
CTGGCCCCAC CAAGGCTCAC GACACTGCTC GCGCGCTGTC GAGAAGAAGA ACCGAGTACA
GAAATCAGGA TTACTGAAAT GACCGTCAGC GAGATGTTAT TGGCTCTCAG CCACGATCAA
ATTGATGTAG GTTTTACCGT CGATAATTCA ATCATACCGG GATACCTCAA AGAGGTTGTA
TGGACAGATC GCCCAGCCAT CGCGATACCG ACTCACCATC CCCTGCTCTC TCAAGAAAAA
ATCTCTGACT CAGAGATACT TCGCTATCCG CTAGTGCTTT GCCACCCCGA GCAGTGTACT
GGTGGATATA ACCTGACTCG ACATTTTTTC AGCAACCCGT CATTTCCAAC ACCAAATATT
GCCGAATATG TTTCAGGACA TGAGCCCATG ATCATGCTGG TTGCAGCAGG CTATGGGATC
GGTATCGGAC TTGAATCCCA AATTGCTCTC TATAACCATC CAAATGTCAT TATCCGAGAA
GCAGCAGACA ATATTCCCAG CACAGCCACG TTTGCCGTAA CCACAGAGAG GGAACGATCA
GCGGAGTTGG AGCGGTTCAT CAGCCGGGCG GTCACGATCG GAGAAATGCC AAGCTTTCCG
CACCTCTCAC ATACCAGAAC CCCGTGA
|
|---|
| Protein sequence | MRIRHLRYFL IVAEEQSFTR AAARVHIEPS PLSRAIKELE NYLGVQLLHR SKGRIRLTWP
GEVFREEAQR IIAFIENAQT RVSSASQGYR GRLRIGLADS LAPPRLTTLL ARCREEEPST
EIRITEMTVS EMLLALSHDQ IDVGFTVDNS IIPGYLKEVV WTDRPAIAIP THHPLLSQEK
ISDSEILRYP LVLCHPEQCT GGYNLTRHFF SNPSFPTPNI AEYVSGHEPM IMLVAAGYGI
GIGLESQIAL YNHPNVIIRE AADNIPSTAT FAVTTERERS AELERFISRA VTIGEMPSFP
HLSHTRTP
|
|---|
| |