| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_1662 |
|---|
| Symbol | |
|---|
| ID | 8530057 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | - |
|---|
| Start bp | 1800916 |
|---|
| End bp | 1802130 |
|---|
| Gene Length | 1215 bp |
|---|
| Protein Length | 404 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003259059 |
|---|
| Protein GI | 261820953 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0554031 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGGGTG GCCAGCCACG CACAAACGGC CCCATCCGGC TGAATGAGTT GTTCGACCAG
GCTTTCTCCC GCCTGCAACC GCAATCCGCG AAGCCGGTTC AATCCACCTC ATCGCCTGCG
GCAACGGATG GTTTCCTCTT TAGCGGCAAC CACCACGACA GTGTGCCACG GGCACTACTG
ATGGACGGGC GACTCACCCC GCTTGAACGC AACGGCTGGC AAGTTTTCCG GTTGATGCTC
GCAGAAGATG GTGTCACCGC GATGCCAACG TACGATCAGC TCGCCCCCTG GCTCGCTTCC
ATGCCGTGCG CGGCCAAAGC GTCTCACGAA ACAGTCGCAC GCACCCTGAC GATGCTGCGC
CTGACCCGAT GGATCAGCCT GGTCAGGCGC AGACGTGATC CACGCACAGG CCGCATTCTG
GGCAACCTCT ATGTCCTGCA CGATGATCCA CTCACTCCCT ATGAGGCAAT CCAGCTTGAC
GCCGACTACC TGGCGTTGGT CAGCCAGTCT CTGGTCCATG CCAGCAAGTC TGTCCAGCGC
GTCGGTGTGT ATACGCTACA GGAGATGTCC CAGGATTCGA TGCTCAGCGG CCAGGTACTG
CCAACCCGAT TGCAGGTGCT GACACAGCGT CTGGCCACAC AGGGCTGGCG TATGGATTCA
CGTTACCCAC AGGATATGAA CGATCACGAT TCCGAAGAAG GGATAACGCC CCCTCTTCGG
AATAATGGCG ACCTGACTTC GGATTCCAAA TCAGGCCTGA GCGCCAGCAA AATCAACCCA
CTTCGGAATC CGAAGAGCAT AAGTACAGTA CATATAAAAG AAAATAATAA AAAAATACTT
ACAGTACCGC GTGCGCAAGA ACTTGGAATG CTGAGTTTCC CGGAACGTTT TATGGCACTC
AAGGCTGAGC AGCAATCCGG TGCACTGGCC GCATTACAGT CGGTTGAACC CAGTTTGCAC
CAATCCGTCC TTGACGAATG GGATGCACGG TGCACGACAA CCAGCATTCG AAATCCTGCG
GGCTATCTGT TTGGCATTAT CCAGAAAGCC CTGCGTGGTG ATTTCCGAGC CTGGGCTGGG
CAGAAGGACA ACACACAAAC AACGCCTGCC ACCACACCAC GTGAAGCACC TCCTCCACCG
CAGCCGCCTG CGGCAAACAG AGATGTCGCA CTGGCCCATC TGGCACGGCT GCGCAAATTG
CTGGATACCC CCTGA
|
|---|
| Protein sequence | MTGGQPRTNG PIRLNELFDQ AFSRLQPQSA KPVQSTSSPA ATDGFLFSGN HHDSVPRALL
MDGRLTPLER NGWQVFRLML AEDGVTAMPT YDQLAPWLAS MPCAAKASHE TVARTLTMLR
LTRWISLVRR RRDPRTGRIL GNLYVLHDDP LTPYEAIQLD ADYLALVSQS LVHASKSVQR
VGVYTLQEMS QDSMLSGQVL PTRLQVLTQR LATQGWRMDS RYPQDMNDHD SEEGITPPLR
NNGDLTSDSK SGLSASKINP LRNPKSISTV HIKENNKKIL TVPRAQELGM LSFPERFMAL
KAEQQSGALA ALQSVEPSLH QSVLDEWDAR CTTTSIRNPA GYLFGIIQKA LRGDFRAWAG
QKDNTQTTPA TTPREAPPPP QPPAANRDVA LAHLARLRKL LDTP
|
|---|
| |