Gene Pecwa_1640 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPecwa_1640 
Symbol 
ID8530035 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium wasabiae WPP163 
KingdomBacteria 
Replicon accessionNC_013421 
Strand- 
Start bp1777993 
End bp1778583 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content62% 
IMG OID 
ProductLytic transglycosylase catalytic 
Protein accessionYP_003259037 
Protein GI261820931 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGCGT CAGCCCTGAC ATCCATGCAA CGAAGGTGGA CGTTGCTGGT CAGCATACTG 
ATGGCTGGCC TGGCTCAGGC TCAGGAGATC CCCCCACCGG CCTACCAGTT GGCGGCTCAA 
CGCGCGGGTG TTCCCTCTGT CGTCCTTTAT GCAGTGGCGT TGCAGGAAAG TGGTGTGCGC 
CGTGCAGAAC GTATCGTGCC GTGGCCGTGG TCGCTGAATG TGGCAGGCCA GTCTCGCCGA 
TACACCAGCC AGGCTCAGGC CTGTGCAGGA GTACACCAGG CCCTGCAAGA CGTACCACTT 
GCCCGCATTG ACGTGGGCCT GGGGCAGATC AATCTCGGTT GGCAAAAGCA TCGCTACCGC 
CAGCCCTGCG ACTTACTCGA TCCGTACAAC AACCTGACGA TCGCGGCACA GATCCTCAAG 
GAGCAGCATA TCCCCGGCGA AGACTGGCTG CTGGCAATGG GCCGCTACCA CCGGCCTGCT 
GGCGGTGCGC CTGCGGCACG CTACCGGCGC AGTGTGTTGC AACACCTTCA ACGCGTATTG 
GGGCCGCAGC AAACTATCCC CACCACTCTC AGCAAGGAAA CCACCCCATG A
 
Protein sequence
MAASALTSMQ RRWTLLVSIL MAGLAQAQEI PPPAYQLAAQ RAGVPSVVLY AVALQESGVR 
RAERIVPWPW SLNVAGQSRR YTSQAQACAG VHQALQDVPL ARIDVGLGQI NLGWQKHRYR 
QPCDLLDPYN NLTIAAQILK EQHIPGEDWL LAMGRYHRPA GGAPAARYRR SVLQHLQRVL 
GPQQTIPTTL SKETTP