Gene Pecwa_1295 details

Gene Information

• Locus tag: Pecwa_1295
• ID: 8529684
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: +
• Start bp: 1406453
• End bp: 1407067
• Gene Length: 615 bp
• Protein Length: 204 aa
• Translation table: 11
• GC content: 40%
• Product: 3-isopropylmalate dehydratase, small subunit
• Protein accession: YP_003258709
• Protein GI: 261820603

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATGGATG CGTTTAAGAA AATTTCAGGA CTGGCCGCTC CCATGCTAGC CGCTAATATC 
GATACTGACG TCATTATGCC TAAACAGTTT CTTAAAGGTA TTGATCGTCA GGGGCTTGAT 
AAAGGCCTTT TTTACGACCT GAGATTTAAT GCTGATGGCA CTGAAAATTC AGATTTCATT 
CTTAATACAC CTCAATGGAA GGGGGCAAAA TTCCTGGTTA CCGGACCAAA TTTTGGGTGC 
GGATCCAGCC GTGAACATGC TGTATGGGGG ATGAAACAAT TAGGTATTCG CGCCCTGATT 
GGCACTTCTT TTGCGGGAAT ATTCAATGAT AATTGCCTAC GCAATGGTGT TCTGACTATC 
ACTCTTGCGG AAGATAAAAT GAGTGAACTG GCTAGGATTA TTTCCCACAT TGAAACAAAT 
GAAATCCTGA TTGATCTTGA GAACCAGATC ATCAGTACCG AAAAAGAAGA TTTTACATTT 
AATGTAGATG AACTGAAGAA AGAGATGTTG GTACAAGGTC TGGATGCAAT TGGCTTAACG 
TTATCCTTTA AGGATGAAAT TATCCAGTTT GAAAATGAAT ATTATTCGGA AAATCCATGG 
CACAAAGTAA GCTGA 

 

Protein sequence

MMDAFKKISG LAAPMLAANI DTDVIMPKQF LKGIDRQGLD KGLFYDLRFN ADGTENSDFI 
LNTPQWKGAK FLVTGPNFGC GSSREHAVWG MKQLGIRALI GTSFAGIFND NCLRNGVLTI 
TLAEDKMSEL ARIISHIETN EILIDLENQI ISTEKEDFTF NVDELKKEML VQGLDAIGLT 
LSFKDEIIQF ENEYYSENPW HKVS