| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_1217 |
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| Symbol | |
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| ID | 8529606 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | - |
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| Start bp | 1324293 |
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| End bp | 1326245 |
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| Gene Length | 1953 bp |
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| Protein Length | 650 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | |
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| Product | diguanylate cyclase/phosphodiesterase with extracellular sensor |
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| Protein accession | YP_003258638 |
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| Protein GI | 261820532 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTTTAT ACAAACAATT ACTGATAGCC ATCTGCCTGT TTGTGCTAAT CATTTTCAGC
GGGAGTTTTT TCGTCAGCCT GGAAAATTCG CGCGAACAAT ATAATAACCA GCTTCACTCA
CATGCACAGG ATGCTGCGAC TGCACTTGGG CTCTCCCTGA CGCCGAATAT TGATGACCCT
GCGATGGTGG AGCTGATGGT CAGCTCAATT TTCGACAGCG GCTATTTTTC CAGTATTCGC
GTGCGAGATT TAAAAACCGG CAACGTCACG CTGGCACGTA CCGCATCACC GGATATCCCT
GACGTACCGA TCTGGTTTGT CCGATTAGTG GACCTTCAGC CCGGTGCAGG CGAAGCCATT
GTGATGCGCG GTTGGGAACA GGCGGCAAAA GTCGAAGTGG TCAGCCACCC GATGTTCGCA
GTAACCCGAC TGTGGCGCAG CAGTACGGCG ACGTTCCTGT GGCTGCTTGG CTGCGGCACG
CTGGGCGTAC TCATCGGTGC GCTGTTCCTG CGCCGCCAGT TACGCCCACT CGACTATATC
GTCGATCAAT CGCTGGCAAT TACCCGCCGT GAATTCCTTA GCCAGCCGGA TCTGCCCAAT
ACGCCGGAAT TCCGCCGCGT CGCACAGGCA ATGAACCTGA TGGTCAGCAA ACTCAAGACA
CTGTTTGAAG AGGAGGCAGA GCGGAGCGAG CGCTTACGTC AGGAAGCCTA TCAGGATCCA
CAAACCGGGC TGAATAACCG CCGTGCATTT GATATGCAAT TCAACGACAA ACTGGCCGAT
GAGGAAACGG CACCCGGCTT TCTTATTATG ATTCGCGTTC AGGATCTGGC GGGTATGAAT
CAACGACTGG GCGGCCAGCG TACTGATGCG CTGTTAGCCT CCGTTGGGAA TATCCTGCGA
AAAATGCAAA AACAGCACAC GAATACGGAA AGTCTTTTAG CGCGCATCCG CGGTGGGGAA
TTTGCCCTGT TCTGCCCTGG CTTGGTTGAT AAAGAAGCCT ATGCGCTGAT TGGAGAACTG
ACGCGTAACA TCGAAACCTT GCATCTGACA GGCGAAACCG ATGTCTCCCC TGTTGCCCAA
TTCGGCATGG TGCCTTTCCG CCACGGCGAC ACCGCACAAT CCCTGTTTAT TCAGGGCGAT
CAGGCGCTCA CGCGAGCCGA AAGCGATACC GATACTGCCG CCTCTCACCA GATTCCGTCA
CTCAGTGCGG AACAGATCGA GACCGATCGC CATATGTGGT TTAACCTGCT CGACCCCATC
CTTGAACAGG AACGTTTGCA GCTTTTCCTG CAACCCGTTG TCGCGTGTGA CGATCCCAGC
CAGATATTAC ATCACAAGGT ACTGGCTCGC ATTCAGGACG CGCAAGGAAA CAGCATCGCG
GCAGGTCGCT TCCTGCCGTG GATCCAACGC TTTGGTTGGG ATACCCGCCT GGATCAGACC
ATGCTACGCG AAGTATTGGC CTATCTCCGC CAGCACGACG GCAACCTCGC ACTGAGCCTG
TCTGGCACCA CAGCCCAGGA TCTTCATCTA CTCACCGACC TGCTCGCCCC GCTGAAGCAT
CAACCAGACA TTGCCAGACG GCTGATTTTG GAGCTGGATG AGAATCAACT GCCAGACAGC
GTCCAACTGG AAGCCTTAAT CAAGCTATTG AATGAGCATG GCTGTGCGCT GGGGTTACAG
CACTTTGGTG GACGCTTTAA TATGATCGGC AACTTGTCCC AGTGGGGACT GGCTTACCTT
AAAGTCGATG GCAGCTACAT CCGTAATATC GATCAGGAAA GCGATAAGCA AATGTTTATC
GAAGCGCTGT ATCGTGCCAC CAACAGCATT GCCTTACCGC TTATCGCCGA ACGCGTTGAA
ACAGCGGGTG AATTAAAAGT GCTTCAGGAG ATGGGATTAC AGGGCGCAAT GGGACGACTG
CTGGGTGAAC CGGCGCTAGC GCTCAAGGCC TGA
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| Protein sequence | MSLYKQLLIA ICLFVLIIFS GSFFVSLENS REQYNNQLHS HAQDAATALG LSLTPNIDDP
AMVELMVSSI FDSGYFSSIR VRDLKTGNVT LARTASPDIP DVPIWFVRLV DLQPGAGEAI
VMRGWEQAAK VEVVSHPMFA VTRLWRSSTA TFLWLLGCGT LGVLIGALFL RRQLRPLDYI
VDQSLAITRR EFLSQPDLPN TPEFRRVAQA MNLMVSKLKT LFEEEAERSE RLRQEAYQDP
QTGLNNRRAF DMQFNDKLAD EETAPGFLIM IRVQDLAGMN QRLGGQRTDA LLASVGNILR
KMQKQHTNTE SLLARIRGGE FALFCPGLVD KEAYALIGEL TRNIETLHLT GETDVSPVAQ
FGMVPFRHGD TAQSLFIQGD QALTRAESDT DTAASHQIPS LSAEQIETDR HMWFNLLDPI
LEQERLQLFL QPVVACDDPS QILHHKVLAR IQDAQGNSIA AGRFLPWIQR FGWDTRLDQT
MLREVLAYLR QHDGNLALSL SGTTAQDLHL LTDLLAPLKH QPDIARRLIL ELDENQLPDS
VQLEALIKLL NEHGCALGLQ HFGGRFNMIG NLSQWGLAYL KVDGSYIRNI DQESDKQMFI
EALYRATNSI ALPLIAERVE TAGELKVLQE MGLQGAMGRL LGEPALALKA
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