| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_1107 |
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| Symbol | |
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| ID | 8529481 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | + |
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| Start bp | 1193503 |
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| End bp | 1194384 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_003258528 |
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| Protein GI | 261820422 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATCGCC TGAGCGCGTT GGAAACATTT ATCTGCGTTT TCGAAACGGG GTCGTTTTCC
GCTGCGTCCC GTAGACTCGG TATTGGACAG CCTGCGGTTT CCAAGGCGAT CATGCAGCTT
GAACAACAAT TGGCCACTCC GCTGTTGATT CGTTCTACCC GAGGGTTGAC GCCAACAGAA
GCCGGACAGC ATTTTTATGA GCAAATCGCT CCCGCGTTAA CGATGCTGGG AGAGGCTCAA
GATCATGTGG TTAGCGGGAA TGCTGCGCTG TCTGGTCGGC TGCGCATTTG TGCACCGGTT
ACTTTTGCCC GGCTGCACAT TATGCCGCGA CTCCATGAAT TTATGGCCGA ACATCCACAA
CTCAACGTTG ATGTCATTCT CGACGATCGT CCGATCGATC TGATTGCTGA AGGTATTGAT
GTGGCATTGC GTTTGGGCGA GATGAAGGAT TCAAGCCTGA TCGCACAGCG GCTGGCCTCG
TGTACTATGC GCCTGTTGGC GACCCCCGAC TATTTTTCCG CTCATGGCAT ACCGGTTTCT
CCTGATGCAC TGTCTGCTTA TCCTGCCGTT ATCTATTTGC AGGGAGAGAG AACCGATCGC
TGGATTTTTT CTCAAGATGG AACACAGACC ATGATATTCC CCAATGGGCG TATCCGTGTT
TCTGCGGCGG AAGGTGTGCG TGCTACGGTG CTGTCCGGCG CAGGGTTGGC TGTGGCATCT
GAATGGATGT TTGCACCAGA GCTTGAAAGC GGACAAGTCA TCACTGTACT GGATTCATGG
TCGCTGGGTA AGATGGATCT GTGGGCTGTC TACCCCGGAG GCCGCATGAC ATCATCGCGC
GTCAGAACTT TTACCAACTT CGTTCAACGT CTCTTTTTCT AA
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| Protein sequence | MDRLSALETF ICVFETGSFS AASRRLGIGQ PAVSKAIMQL EQQLATPLLI RSTRGLTPTE
AGQHFYEQIA PALTMLGEAQ DHVVSGNAAL SGRLRICAPV TFARLHIMPR LHEFMAEHPQ
LNVDVILDDR PIDLIAEGID VALRLGEMKD SSLIAQRLAS CTMRLLATPD YFSAHGIPVS
PDALSAYPAV IYLQGERTDR WIFSQDGTQT MIFPNGRIRV SAAEGVRATV LSGAGLAVAS
EWMFAPELES GQVITVLDSW SLGKMDLWAV YPGGRMTSSR VRTFTNFVQR LFF
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