Gene Pecwa_1052 details

Gene Information

• Locus tag: Pecwa_1052
• ID: 8529426
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: +
• Start bp: 1139926
• End bp: 1140711
• Gene Length: 786 bp
• Protein Length: 261 aa
• Translation table: 11
• GC content: 54%
• Product: transcriptional regulator, IclR family
• Protein accession: YP_003258476
• Protein GI: 261820370

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAAAACCC GCAACGTCCA GCCTGTGACG AACGCAACTG AAGAGGCGAC TCGAACCGAA 
AGCGTGAAAG GGGAGCTTAA GACGCTGACA AAAGGCCTGG CGGCGCTTGA TTTGCTGATA 
CATAACCAAA CGGTGCGAAC CAGCGATGTC GCCGATGTGC TTGCGATAGA TAAAAGTAGT 
GCATCACGTA TTCTGCAAAC GCTGGCTCAG GCGGGCTATG CGCAATCCGG CGAACGTCGC 
AGCTTTATGC TCGGGCCCAA ATTGGCTGAG CGGCCGAATA CCGTGCGCCC GCAGAAAAGC 
CTGCGCGTGT GTGCCCGGCC GGTTCTGGAA CGTTTATCTG CCCGTACCGG AGAAGCGGTA 
CATTTATCGA TTCTGGCAGA CGAACAGGTT TTGTACCTGG ATACGATCGA ATCCCGCTAC 
TCTTTGCGGG TTGATAGCCG TCCCGGTACT TTGGCTCCCT TGGCGTACAC GGCGATTGGC 
CGGATTTTTC TGGCACTGGC GGATGCACCA TTACCCGAAC AATTGCATGC GCAAACGGAG 
CATACCATCA CCGATCCACG TCTCTTTCAG ATAGCGCTGC AGACTATCGC ACAGCAGGGT 
TACGCACTGC ATGATGAAGA GTTTCATTTG GGAATTCGCG GTGCGGCGGC ACCGTTGTTC 
GACCGTAACG GTTACGTCAT TGGGGCTGTT GGCGTTTCAG GTCCAACTGT CCGTATTCGC 
ACCGAAGACC TTGATGCATT GGGGATACTG GTGCGTGAAG AAGCGAATAA ATTTATCATG 
GAATAA 

 

Protein sequence

MKTRNVQPVT NATEEATRTE SVKGELKTLT KGLAALDLLI HNQTVRTSDV ADVLAIDKSS 
ASRILQTLAQ AGYAQSGERR SFMLGPKLAE RPNTVRPQKS LRVCARPVLE RLSARTGEAV 
HLSILADEQV LYLDTIESRY SLRVDSRPGT LAPLAYTAIG RIFLALADAP LPEQLHAQTE 
HTITDPRLFQ IALQTIAQQG YALHDEEFHL GIRGAAAPLF DRNGYVIGAV GVSGPTVRIR 
TEDLDALGIL VREEANKFIM E