| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_0946 |
|---|
| Symbol | |
|---|
| ID | 8529319 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | - |
|---|
| Start bp | 1016444 |
|---|
| End bp | 1017655 |
|---|
| Gene Length | 1212 bp |
|---|
| Protein Length | 403 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | |
|---|
| Product | major facilitator superfamily MFS_1 |
|---|
| Protein accession | YP_003258371 |
|---|
| Protein GI | 261820265 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.493578 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACTCCTC TTGAGATAGC CGACGCGCCG CAAAAATCCT TGTCCTGTTG GCCGCTGGCG
TTCAGCGCGG GGCTACTTGG CGTCGGGCAG AATGGCCTGC TGGTGGCGAT CCCGGTTCTG
GTGATTCAGA CAAACCTTAG CCTGTCGATT TGGGCGGCGC TTTTAACGCT TGGCTCAATG
CTGTTTCTGC CATCGTCGCC GTGGTGGGGA AAACAGATCG CGCGCCGGGG CAGCAAACCG
GTGGTGCTCT GGGCGCTGGG GGGATACGGC GCGAGCTTTG CGCTGCTTGG CCTGGGCAGC
GTGCTGCTGG CGACTCACGC CATTCCTCCG GGGGCGGGCA TCGGGTTGTT AATTATCGCA
CGGATTATCT ACGGGCTTAC CGTGTCGGCG ATGGTTCCGG CCTGTCAGGT CTGGGCCTTA
CAGCGCGCAG GGGAAGCCAA ACGAATGGCG GCGCTGGCGA CCATCAGTTC GGGATTAAGC
TGCGGTCGAC TGTTCGGGCC GCTGTGCGCC GCGGCGATGC TGACGCTGCA TCCGCTTGCG
CCGATGGCGC TGTTAATGGT CGCGCCGCTG CTGGCGCTTA TCATGCTGCT GCGTTTACCG
GGCACGCCGC CGCAGCCCGC AGCCAGTCGC AAAAGCGTGC GCCTCACGCC TGTATGCCTG
CCGTATCTCC TCTGCGCGCT GCTGCTGTCG GCGACCGTCA GCCTGATGCA GCTTGGCCTG
TCTCCCGCGC TCGCCCGCCA GTTCGCCACG GATACCGCCG CGATTAGTCA TCAGGTAGCG
TGGCTGCTCA GCGTGGCGGC GGTAGCATCG CTGATTGCTC AGTTTGGCGT GCTGCGCCCC
CAGCGGCTGA CGCCGATGGC GCTGCTGTTA AGCGCCGGGG CACTCATGTT ATGCGGTCTG
GCGTTGATGA TATCTGTTCC GCTGTGGCTG TTTTATCCCG GCTGCGCACT GCTCTCCTTC
GGGGCTGCGC TGGCGACGCC CGCCTATCAG CTTCTGCTTA ACGACAAACT TGCCGACGGC
GCGGGCGCAG GCTGGGTTGC CACCAGCCAC ACGCTGGGCT ACGGACTTTG CGCCATGCTA
GTGCCGCTGG TCTCGCGAAC CGGCATCAGC GTGGCGCTGC TGGTGACGGC TTTTGTCGCC
GCCGCTATCT TCACCGGGGT GTCTGGCTTT ATCTGGCTCA GCCGCCGCCA TTCATCGTCT
TCCGCAATCT AA
|
|---|
| Protein sequence | MTPLEIADAP QKSLSCWPLA FSAGLLGVGQ NGLLVAIPVL VIQTNLSLSI WAALLTLGSM
LFLPSSPWWG KQIARRGSKP VVLWALGGYG ASFALLGLGS VLLATHAIPP GAGIGLLIIA
RIIYGLTVSA MVPACQVWAL QRAGEAKRMA ALATISSGLS CGRLFGPLCA AAMLTLHPLA
PMALLMVAPL LALIMLLRLP GTPPQPAASR KSVRLTPVCL PYLLCALLLS ATVSLMQLGL
SPALARQFAT DTAAISHQVA WLLSVAAVAS LIAQFGVLRP QRLTPMALLL SAGALMLCGL
ALMISVPLWL FYPGCALLSF GAALATPAYQ LLLNDKLADG AGAGWVATSH TLGYGLCAML
VPLVSRTGIS VALLVTAFVA AAIFTGVSGF IWLSRRHSSS SAI
|
|---|
| |