| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_0776 |
|---|
| Symbol | |
|---|
| ID | 8529142 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | - |
|---|
| Start bp | 822960 |
|---|
| End bp | 823694 |
|---|
| Gene Length | 735 bp |
|---|
| Protein Length | 244 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | |
|---|
| Product | transcriptional regulator, GntR family |
|---|
| Protein accession | YP_003258202 |
|---|
| Protein GI | 261820096 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGATG GCATTACAGA AAAACAGAAA GAGGTGGTCG ATTACATCCT TAAGAAAATC
AAGGATGATA GCCTCTTGCC TGGGGATAAG CTTGATACTG AAATCGCTAT CGCCAAAAAC
ATAGGAATTA CCCGTGCCAC CGTTCGCGAA GCGACACGTA TCCTGATTGA ACAACAGAGA
ATTTACCGGG TAAAAGGGTC TGGGCTGTTT GTTGGTTCAA TCGGGATAAG CAACCACTCA
GGGAGGTTTC ACGTACTTTC CCCTTTTGAT TATCAGGCCC AAAAACACGG TCACAAAGGG
GTCAGAAAAA TTGTATCTGC CAGCATAATA AAAGTCCCGT CACCGGATAT GGCACAGGCG
TTGCGCATTA AGAATAGCGA CAAGGTGTAT AAAATATTAC GTCTGATGTG CTTCGATAAT
ATCCCTGTGG CGCTGGAACA CATACATCTT CCGGTAAGCA TGTTTAGCAG TATGGAGTTC
AGCAAATTAG AAATATCAAA ATACGCCTAC ATCGAGCAAA TTACCGGTAA AAAAGTCCAG
CGTAGGGATC AAAACTTAAC GGCAAAAAAA TTAACCGATC CTGACACCTT GGCTTTACTG
AATTTATCGG AAAATGATGC CGTTATGGAG ATTAATGAAA CCGTCTTTCT GGATGATGGA
ACCCCTTGTG AAGTGAATAT TGCAATTATC AATACCCAGC TTTTCCCATT GCGACAAAAC
TCAGAGCGGC CTTAA
|
|---|
| Protein sequence | MADGITEKQK EVVDYILKKI KDDSLLPGDK LDTEIAIAKN IGITRATVRE ATRILIEQQR
IYRVKGSGLF VGSIGISNHS GRFHVLSPFD YQAQKHGHKG VRKIVSASII KVPSPDMAQA
LRIKNSDKVY KILRLMCFDN IPVALEHIHL PVSMFSSMEF SKLEISKYAY IEQITGKKVQ
RRDQNLTAKK LTDPDTLALL NLSENDAVME INETVFLDDG TPCEVNIAII NTQLFPLRQN
SERP
|
|---|
| |