Gene Pecwa_0588 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPecwa_0588 
Symbol 
ID8528953 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium wasabiae WPP163 
KingdomBacteria 
Replicon accessionNC_013421 
Strand
Start bp634774 
End bp635985 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content46% 
IMG OID 
Productputative capsular polysaccharide bisynthesis protein 
Protein accessionYP_003258023 
Protein GI261819917 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTTAC TAAAAAGCGT TTCTACCATT GCGGGTTCAT CGGTAGTTTC ACAATTGATT 
GGCGCGCTGT CTATCTGGCT GATTTCGCAT AAATACAATA TGGCCGAGGT GGGGATCTAC
GCGCTGAGTT ACAGCATCGT GTTGGTGGGA GCGCAGGTCT GTACCTTTGC TTCGCAACTG
CTGATTCCGA AACAGCAAGA TAGTGAACTG GCGCAGAGTG TGGTGTTCAG CACACTGCAA
AGTCTGCTTA CCGCAGTGCC CTATGCGATG TTGACCGCAT GGCTGTTTCA GCGAAATGTG
TTCTTTCTCT ACCTGCTCAC GCTGTCCTAT GCGTTGGTGC TGATCTCGGA GAATTTGTCT
CTGCGCGAGG GTAACTACCG TTTTCTGGCC TTTCAGCGAC TCGCCGTCTC GGTGGTGGTC
GTGCTTTCGC TGGTGTTCAC TTCACATACC ACCGTGTTTT ATTGGTCCTG GGCCTGCGCC
ATGATGGTGC TGATTAGCGG CTGTATTCTG TTCTCGTTCA ATATTCACAC CATAACGTTT
GGACATTTTA GCCCGCAACG TAATATGGCT TTCTTTCATC AGCATGCTCA TCATCTCACC
CGCGTTGGCA GCGCCGAGGT GCTGGCGATG GTTAATAATA ATTTGCCGGT TATGCTGATT
AATTTTTGGT TTTCCGCGTT GACGGCAGGG TATTTCTCGG TAGTGAGCCG TTTTTGTTTA
TCTCCGGTGG TGATCATCGG CAATGCGGTG CGTAATTCTA TTTTTTCAAC CTGGTCTGCC
GATTTCAGAA ATAAACGTTT CAACTATGAT GAGTTCAAAA AAGTTCGTCT GGTATTATTG
ATGGCGGGGG TGGTTTGCAC ATTAGGGGTG TTTGTTTTTT ATCCGTTAGT GATGCATCTT
TTTTTTAGCG AGGAGTGGAT TAATTCCATT CCAAGCTCTC GCTATATGTT GCCTTATTTA
TTTCCGGCGC TGGCGGTGTG TCCGCTGACG GTGATTGAGT TAATATTTGG CTCTCATCGC
TATTTCTTGC GTATCCAATT AGAACAATTG AGTGTGGTAT TAATCGCATT TGTGATTGTG
CCTTATTTTT ATAATCACTA TGCCGCATCA ATGATTCTTT TTTCTGTGCT GACGTTTGTA
CGCTACGCGT TTATTTATCT CAAAGTAAAC AAACGTGCTA ATGGTCTGAA AAATATGATG
ACAGAACCAT GA
 
Protein sequence
MSLLKSVSTI AGSSVVSQLI GALSIWLISH KYNMAEVGIY ALSYSIVLVG AQVCTFASQL 
LIPKQQDSEL AQSVVFSTLQ SLLTAVPYAM LTAWLFQRNV FFLYLLTLSY ALVLISENLS
LREGNYRFLA FQRLAVSVVV VLSLVFTSHT TVFYWSWACA MMVLISGCIL FSFNIHTITF
GHFSPQRNMA FFHQHAHHLT RVGSAEVLAM VNNNLPVMLI NFWFSALTAG YFSVVSRFCL
SPVVIIGNAV RNSIFSTWSA DFRNKRFNYD EFKKVRLVLL MAGVVCTLGV FVFYPLVMHL
FFSEEWINSI PSSRYMLPYL FPALAVCPLT VIELIFGSHR YFLRIQLEQL SVVLIAFVIV
PYFYNHYAAS MILFSVLTFV RYAFIYLKVN KRANGLKNMM TEP