Gene Pecwa_0290 details

Gene Information

• Locus tag: Pecwa_0290
• ID: 8528652
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: +
• Start bp: 322907
• End bp: 323473
• Gene Length: 567 bp
• Protein Length: 188 aa
• Translation table: 11
• GC content: 51%
• Product: Mammalian cell entry related domain protein
• Protein accession: YP_003257750
• Protein GI: 261819644

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.151432
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAAACAA AGAAAACTGA AGTTTGGGTT GGTGTGTTTA TGTTGATCGC GCTGGCTGGC 
ATTCTCTTTT TATGTCTGAA AGTGGCCGAT CTCAAATCGA TCGGCAGTGA GCCAACGTAT 
CGCCTGTACG CGACGTTTGA CAACATTGGC GGGTTGAAAG CGCGTTCTCC GATCAGAATT 
GGCGGTGTGG TTATTGGTCG CGTAGCGGAT ATCTCGCTGG ATGAGAAAAC GTATTTGCCA 
CGCGTGGCGA TGGATATTCA GCAGCGCTAC GATCATATTC CCGATACCAG TTCTCTGGCT 
ATTCGTACCT CTGGCTTGCT GGGCGAACAG TATCTGGCAC TGAACATGGG GTTTGAAGAT 
GAAGAGATGG GCACGACGAT CCTGAAGGAC GGTGGTGTGA TTCAGGATAC CAAGTCTGCC 
ATGGTGCTTG AAGATCTCAT CGGCCAATTC CTATATAAGA GCGGCGGCAA TAGCGAGGAT 
AATGCCGGTC AATCGGGTAC GGAGCCGGGT GCCGATCCTG CGGCAAACCC TGAGCACAGC 
AACGAACCTG TTCCTTCACA TCCATAA 

 

Protein sequence

MQTKKTEVWV GVFMLIALAG ILFLCLKVAD LKSIGSEPTY RLYATFDNIG GLKARSPIRI 
GGVVIGRVAD ISLDEKTYLP RVAMDIQQRY DHIPDTSSLA IRTSGLLGEQ YLALNMGFED 
EEMGTTILKD GGVIQDTKSA MVLEDLIGQF LYKSGGNSED NAGQSGTEPG ADPAANPEHS 
NEPVPSHP