Gene Pecwa_0273 details

Gene Information

• Locus tag: Pecwa_0273
• ID: 8528635
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: +
• Start bp: 307838
• End bp: 309826
• Gene Length: 1989 bp
• Protein Length: 662 aa
• Translation table: 11
• GC content: 52%
• Product: p-hydroxybenzoic acid efflux subunit AaeB
• Protein accession: YP_003257733
• Protein GI: 261819627

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.489457
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAACCT CGTTGTTGGC AGACCCCCTA TTCTTTACGA CACCACAGCT TGCGCGCTTT 
CGCTTTGCTT TTAAGCTGAC CTTTGCCGTC GTACTTTCCC TGTTCCTGGG GTTTCACCTG 
CAATTGGGGA CCCCGAATAC GGCAGTTATG ACGGCGGCGA TTGTCGCTGG TGGCCCTGCG 
TTCGTGGCAG GTGGTGAGCC GTTTTCTGGT GCCATTCGTC ATCGAGGCAT GTTGCGTATT 
GTCGGTACAT TTATCGGCTG TATTGGTGCA CTTGCCATCA TTATCTCCAC TATTCGCGCA 
CCTATTGTGA TGATGCTGCT GTGCTGTATT TGGGCTGGCC TCTGCAATTG GATTTCTTCG 
CTGGTTAAAA TCGAAAATTC CTATATTTTC GGGCTCGCAG GCTATACCAC GTTGATTATT 
ATTCTGGCGA CGCAAGGGAC GCCGATGTTG ACGCCGCAGT TTGCTGTGGA GCGCTGTAGT 
GAGATTGTGT TGGGTATTGC CTGTGTCATT TTTGCGGATT TACTGTTCGC ACCGCGATCG 
ATCAAGCAGG ATGTTGACCG TAGCCTTCGC GAGCTGATGG TAGGTCAGTA CCGGTTACTA 
CAACTCAGCA TGAGTGGAGC AGACGAGGGG ACGATAGACA CGACATGGCA CGCATTGGTG 
CGCAAGACTA CTGCACTAGA CGGCATGCGC AGCAATCTGA TGATGGAGTC ATCGCGCTGG 
CAGAACAGTA ATCGTCGCTT AACGTCGCTG CACACACAAT CACTTACGAT GATTACACAA 
GCGTGTGAAA CCTATCTGAC ATTGCAAGAT GTTCCTACGC ATGTAAAAAG TAGCCTGAAG 
CAGGTGTTGG ATCCGCCCGT CGAATCGTTT GGTGATGTGC ATCACCATGT GAAAGCATTG 
CGCCACCTGA TTGCCGCCGA CAGTCGCGAC GTGCCGCCTA CGTTGGTTAG TTGGGTTGGA 
GCGGCAACGC GCTACCTGCT GTTGGTGAAG GGGGTGCAGA CTAACGGACG TATCAGTAAG 
ATCGAAGCTG ATGTGTTGAA CCACGATGTG GAAATTAAAG TACCATCAGC CGAAACCCAC 
CATGCGATGA TCAACGGCTT ACGCACTGGT GTGGCGACCG CATTGGGCTG CCTGTTCTGG 
CTCAGTACGG GATGGAGCTC TGGCGGTATT TGTATGATGA TGATTGCGGT AGTGACGTCG 
CTTGCGATGC GCCTGCCGAA TCCTAAGATG GTGGGGATGG ATTTTCTGTA CGGGACGATC 
TATTCGCTAC CGCTGGGGGC GTTGATGTTT ATGTTTATTC TACCGTCAAC GCAGCAAAGT 
ATATTACTGC TGTGCCTAAG CCTGGGCGCA ATGACCTTCT TTCTCGGCGT TGAAGTACAG 
AAGCGTCGGC TGGGCTCGCT GGGGGCATTG ATCAGTACGA TTAATGTTCT CTTACTGAAT 
AACCCGATGA CGTTTAACAT CAGCTTATTT CTGGACAACG CGATCGGTCA GATTATTGGC 
TGTTTCGTGG CGTTGATGGT GATCCTGCTG ATTCGCGATA ACACCAAATC GCATACGGGA 
AGAACGCTAC TGAACCGTTT TGTGTATGGC GCGGTTTCTG CGCTGACAAC CGATACGACG 
CGGCGTAAGG AAAATCATCT ACCAGCGCTG TACCAACAAC TGTTCCTGCT GCTGAACCGC 
TTCCCTGACG ACATGGCTAA GTATCGCCTT GCCTTATGGA TGATCATCAT GCATCAACGT 
CTGAGAACGC TGGATATTCC GCAAAACGCG GCGCTGTCTG CCTTTCATCG TCAGATTCGT 
GCGACGGCTG AGCAGGTGAT TTTGGCCCGC CGCGATACCA CGCGCAGCCG CTATTTCACG 
CAGTTGTTAG AGGAACTCGA ACGCTACCAA CAGATACTGA CAGAACAGCA ACTTCCCCCG 
AACGTGACGG TACCTGTGGG ACGGTTGACT GGGATTCTAC GTGATTATCA GCATGCGCTG 
AGCGACTAA 

 

Protein sequence

MKTSLLADPL FFTTPQLARF RFAFKLTFAV VLSLFLGFHL QLGTPNTAVM TAAIVAGGPA 
FVAGGEPFSG AIRHRGMLRI VGTFIGCIGA LAIIISTIRA PIVMMLLCCI WAGLCNWISS 
LVKIENSYIF GLAGYTTLII ILATQGTPML TPQFAVERCS EIVLGIACVI FADLLFAPRS 
IKQDVDRSLR ELMVGQYRLL QLSMSGADEG TIDTTWHALV RKTTALDGMR SNLMMESSRW 
QNSNRRLTSL HTQSLTMITQ ACETYLTLQD VPTHVKSSLK QVLDPPVESF GDVHHHVKAL 
RHLIAADSRD VPPTLVSWVG AATRYLLLVK GVQTNGRISK IEADVLNHDV EIKVPSAETH 
HAMINGLRTG VATALGCLFW LSTGWSSGGI CMMMIAVVTS LAMRLPNPKM VGMDFLYGTI 
YSLPLGALMF MFILPSTQQS ILLLCLSLGA MTFFLGVEVQ KRRLGSLGAL ISTINVLLLN 
NPMTFNISLF LDNAIGQIIG CFVALMVILL IRDNTKSHTG RTLLNRFVYG AVSALTTDTT 
RRKENHLPAL YQQLFLLLNR FPDDMAKYRL ALWMIIMHQR LRTLDIPQNA ALSAFHRQIR 
ATAEQVILAR RDTTRSRYFT QLLEELERYQ QILTEQQLPP NVTVPVGRLT GILRDYQHAL 
SD