Gene Pecwa_0252 details

Gene Information

• Locus tag: Pecwa_0252
• ID: 8528614
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: +
• Start bp: 283734
• End bp: 285725
• Gene Length: 1992 bp
• Protein Length: 663 aa
• Translation table: 11
• GC content: 50%
• Product: TonB-dependent receptor
• Protein accession: YP_003257713
• Protein GI: 261819607

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.945527
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAAATAA AACAATTAAG TTGGTTGTTG TCCGTCAGTT TATTACCAGC CTCTTGTGCT 
TATGCCGCCG CTGGTGAAAC GGCTGAGGCC ACGAAGGATA AGGACGTGAT GACGGTGTGG 
AGCAGTCCGG TCGCGGCGAC CAACGATGTG GTCAATCAGG AAACCATTAA CCGATTAAAT 
CGACGCAACG TGGCGGAAGC GCTGAATATC GTGCCGGGTG TGATGTTACA AAAGTCAGGC 
GGACGCAGCG AGCAACAGGT GAAAGTCCGC GGATTTGATA GCCGACAAGT GCCGGTTTTC 
CTCGACGGCG TGCCGATTTA TGTTCCCTAT GATGGGAATC TGGATCTTGG CCGTTTCCAG 
GCTTCCGACT TGGCAGCGGT TGAGGTGTCT AAAGGGTATA CCTCTTTGCT GCAAGGCCCG 
AATCAAATGG GAGGCTCGAT TAACCTCACG ACGCTGCGGC CGAAAAAAGA GTTGGAAGCC 
AATGTGCGTG TGAATCAGGG TTGGTCACGC GGGCGTGACA ATGCCCATAA CATGGATGCA 
TCGTTTGGCG GGAAAAGCGA ACTGGGGTTC TTTCAGATTA GCGGTAGCCG CCAGAAGCAA 
CGGTTTACCG GGTTGCCCCA TGGAGTTGAT AACCCGACTG CCGGTAGTGA AGGCCAACGG 
ATGAATTCCG CCAACGATGA TAAGCGCGGC ATGCTTAAGG TTGGGTTTAC ACCACGTGAA 
TCAGATGAAT ATACGTTCAC CTACATCAAT CAGGAAGGTG AAAAGAATAC GCCGCCTTAT 
GCGGGCAACA GCAGTCAGTC GGCACGCTAT TGGCAATGGC CGGACTACAA CAAGAAAAGT 
TATTACTATC AGGGTACGAC AAAGTTAAGT GACAGAATGA CGTTAAAAAG CCGCTTCTAT 
CACGATGAAT TTGAAAATAC CTTGCTGATG TATAAAACGC TGGCGGATTT CAAAAGCAAG 
GTTGGGAACT ATAGCCACTA TGCGGATTTC AGTAACGGCG CGGGGCTGCA ATTAGGCATT 
GATATGCGCG AACTGGATCA ACTGTCGTTT GCCATACACT GGAAAGATGA TGTGCATCGT 
GAAAAAGGGG CATTGGATGC GCCTTACGAT CGCTATAAAG ATCGTACCTG GTCGATGGCA 
AGTGAATACC AGTGGAATCT GTCCGACAAG CTGGACGCGG TATTTGGCAT GAGCTACGAC 
TGGCGCGACA GTAAGCAGGG TATGAAGCAT GAGAAGAATG GCACCCTGAC GAATTATGAC 
CAAAATAATC AGGATGCGTT TAACTGGCAG ATGATGACGA AATATCGCTT CGATAATCGC 
GATGAGCTGC AATTGTCGCT GTCTGAACGC AGCCGTTTCC CCACGCTGAA AGAGCGTTAC 
ACCACGTCTA AGCCTGCCAA AAATCAGACC GCATTGGTTA ATCCAAACTT AAAACCAGAG 
CGTGCACAAA ACCTTGAGCT GAACTATCGC GGTGGACTTA CCGAAGGCTG GGGCTACGAT 
GCCAGCGTGT ATTACAACCG GGTATCGGAT GCGATTCTGG CGCATAACAT TACGCCGAGC 
CTGATCCAAA ACCGTAACAG TGGCCGGGTG GATTACTACG GTATGGATCT GGGCATTCAC 
GGTGATGTCA AAGACTGGCT AACCGTCGGA GTTAACTATG GGCTGATTCA TAGTGACGCG 
AAACGCAAAG ACATCGGCAA CATTGTGGAT CTGCCGAAGC ATAAGGTGTT TGCCTGGGCA 
ACGATCACGC CTGTTGAGCC GGTCAGCATT ACGGTGATGG AAGAAGCGCG TAGCTGGGGA 
TTCAATAATT CAGATAATAA CGATAAAACG CGCGGATTTG CGATGACCAA TGTGCGGGTG 
GATTATCGTC TGGGTGCGGG TTTCAGCGTG AATGCATCCG TAAATAATCT GTTTGATACG 
GCTTACGCTT ATCAGGAAGG GTATGTTGAG GAAGGACGGA ATTATTGGTT AGGTGTTGCT 
TACCAATACT AA 

 

Protein sequence

MQIKQLSWLL SVSLLPASCA YAAAGETAEA TKDKDVMTVW SSPVAATNDV VNQETINRLN 
RRNVAEALNI VPGVMLQKSG GRSEQQVKVR GFDSRQVPVF LDGVPIYVPY DGNLDLGRFQ 
ASDLAAVEVS KGYTSLLQGP NQMGGSINLT TLRPKKELEA NVRVNQGWSR GRDNAHNMDA 
SFGGKSELGF FQISGSRQKQ RFTGLPHGVD NPTAGSEGQR MNSANDDKRG MLKVGFTPRE 
SDEYTFTYIN QEGEKNTPPY AGNSSQSARY WQWPDYNKKS YYYQGTTKLS DRMTLKSRFY 
HDEFENTLLM YKTLADFKSK VGNYSHYADF SNGAGLQLGI DMRELDQLSF AIHWKDDVHR 
EKGALDAPYD RYKDRTWSMA SEYQWNLSDK LDAVFGMSYD WRDSKQGMKH EKNGTLTNYD 
QNNQDAFNWQ MMTKYRFDNR DELQLSLSER SRFPTLKERY TTSKPAKNQT ALVNPNLKPE 
RAQNLELNYR GGLTEGWGYD ASVYYNRVSD AILAHNITPS LIQNRNSGRV DYYGMDLGIH 
GDVKDWLTVG VNYGLIHSDA KRKDIGNIVD LPKHKVFAWA TITPVEPVSI TVMEEARSWG 
FNNSDNNDKT RGFAMTNVRV DYRLGAGFSV NASVNNLFDT AYAYQEGYVE EGRNYWLGVA 
YQY