| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GYMC61_1004 |
|---|
| Symbol | holA |
|---|
| ID | 8524828 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacillus sp. Y412MC61 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013411 |
|---|
| Strand | + |
|---|
| Start bp | 1000273 |
|---|
| End bp | 1001319 |
|---|
| Gene Length | 1047 bp |
|---|
| Protein Length | 348 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | |
|---|
| Product | DNA polymerase III subunit delta |
|---|
| Protein accession | YP_003252151 |
|---|
| Protein GI | 261418469 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGGAAC GCGTATGGGG AAACATTGAA AAACGGCGTT TTTCTCCCCT TTATTTATTA
TACGGCAATG AGCCGTTTTT ATTAACGGAA ACGTATGAGC GATTGGTGAA CGCAGCGCTT
GGCCCCGAGG AGCGGGAGTG GAACTTGGCT GTGTACGACT GCGAGGAAAC GCCGATCGAG
GCGGCGCTTG AGGAGGCCGA GACGGTGCCG TTTTTCGGCG AGCGGCGTGT CATTCTCATC
AAGCATCCAT ATTTTTTTAC GTCTGAAAAA GAGAAGGAGA TCGAACATGA TTTGGCGAAG
CTGGAGGCGT ACTTGAAGGC GCCGTCGCCG TTTTCGATCG TCGTCTTTTT CGCGCCGTAC
GAGAAGCTTG ATGAGCGAAA AAAAATTACG AAGCTCGCCA AAGAGCAAAG CGAAGTCGTC
ATCGCCGCCC CGCTCGCCGA AGCGGAGCTG CGTGCCTGGG TGCGGCGCCG CATCGAGAGC
CAAGGGGCGC AAGCAAGCGA CGAGGCGATT GATGTCCTGT TGCGGCGGGC CGGGACGCAG
CTTTCCGCCT TGGCGAATGA AATCGATAAA TTGGCCCTGT TTGCCGGATC GGGCGGAACC
ATCGAGGCGG CGGCGGTTGA GCGGCTTGTC GCCCGCACGC CGGAAGAAAA CGTATTTGTG
CTTGTCGAGC AAGTGGCGAA GCGCGACATT CCAGCAGCGT TGCAGACGTT TTATGATCTG
CTTGAAAACA ATGAAGAGCC GATCAAAATT TTGGCGTTGC TCGCCGCCCA TTTCCGCTTG
CTTTCGCAAG TGAAATGGCT TGCCTCCTTA GGCTACGGAC AGGCGCAAAT TGCTGCGGCG
CTCAAGGTGC ACCCGTTCCG CGTCAAGCTC GCTCTTGCTC AAGCGGCCCG CTTCGCTGAC
GGAGAGCTTG CTGAGGCGAT CAACGAGCTC GCTGACGCCG ATTACGAAGT GAAAAGCGGG
GCGGTCGATC GCCGGTTGGC CGTTGAGCTG CTTCTGATGC GCTGGGGCGC CCGCCCGGCG
CAAGCGGGGC GCCACGGCCG GCGGTGA
|
|---|
| Protein sequence | MLERVWGNIE KRRFSPLYLL YGNEPFLLTE TYERLVNAAL GPEEREWNLA VYDCEETPIE
AALEEAETVP FFGERRVILI KHPYFFTSEK EKEIEHDLAK LEAYLKAPSP FSIVVFFAPY
EKLDERKKIT KLAKEQSEVV IAAPLAEAEL RAWVRRRIES QGAQASDEAI DVLLRRAGTQ
LSALANEIDK LALFAGSGGT IEAAAVERLV ARTPEENVFV LVEQVAKRDI PAALQTFYDL
LENNEEPIKI LALLAAHFRL LSQVKWLASL GYGQAQIAAA LKVHPFRVKL ALAQAARFAD
GELAEAINEL ADADYEVKSG AVDRRLAVEL LLMRWGARPA QAGRHGRR
|
|---|
| |