| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_1964 |
|---|
| Symbol | |
|---|
| ID | 8491971 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ammonifex degensii KC4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013385 |
|---|
| Strand | + |
|---|
| Start bp | 1969407 |
|---|
| End bp | 1970252 |
|---|
| Gene Length | 846 bp |
|---|
| Protein Length | 281 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 646359953 |
|---|
| Product | putative circadian clock protein, KaiC |
|---|
| Protein accession | YP_003239893 |
|---|
| Protein GI | 260893796 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0467] RecA-superfamily ATPases implicated in signal transduction |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATCG TTCGGCTTAA AGAGATGCGG GACCGGATAC CCAAGCTTTT CGGCATCCCT
TCCGGCGTAC CTGGACTTGA CGATCTCTTC TTTACGGTAA CCTTCGAGGA GGAGGGGTAC
CGCCGCGTCT CCCTCAAGGG CATCCCCTCG GCAGCGGTTG TTCACCTCAC TGGGGTGCCG
GACACCGGCA AGTCACTCAT GGCCGAGCAG TTTGCCCTGA CCCAGGCAGC ACGGGGATTC
GCCACCCTCT ACGTGACGGT AGAGGTTCCC GCCCACTTCC TGGCCCAGGG GTTGAAGCTG
CGGGCACGCG CCATGAACCT GAGCTGGGAG ACCATAGAGG AAGGGCTTTA CCTTCTCGAT
CTGGCCCGCA TGCCGGAAGA GAAGGAGAAC ATCGGGGAAC TCTGCGAGTC TTTGGCTAGG
ATTATTCGGG AAGAGGAGAT TAAGGCCTGC GTGATCGACT CGGTGACCGG GCTTTACGAG
GGCAGAGAAA CAGCGGCCCG CACCACCGTC CGCCGCCTCT ACGAGGTGAT GAAGGACCAC
TACCAGACAG CCATCTTCGT CTCGCAGAAA CGCAGCAGCC ACGAGGAGAT GTCGGCAGAA
GCTGCTGGCG GCTACGGCGT TTCCCATATC CTGGATTGCA CCATTGTGCT GGCCAAGATG
GTGGTTAGCC GCAGCACCGC TTCTCTTTAC GGCAAGGCGC CGGGCGAGTT AGTGCGTACC
TTGCGGATAG ACGGTTGCCG CCTTTGCGGC CACGATACCC GTGTACACCT TTTGGAGATA
GACGACGCAG GCATCGTGAG GGTAGGACCA CCTCTTAGCG AGCTGGCAGC CGAAACGCGC
CTCTAA
|
|---|
| Protein sequence | MKIVRLKEMR DRIPKLFGIP SGVPGLDDLF FTVTFEEEGY RRVSLKGIPS AAVVHLTGVP
DTGKSLMAEQ FALTQAARGF ATLYVTVEVP AHFLAQGLKL RARAMNLSWE TIEEGLYLLD
LARMPEEKEN IGELCESLAR IIREEEIKAC VIDSVTGLYE GRETAARTTV RRLYEVMKDH
YQTAIFVSQK RSSHEEMSAE AAGGYGVSHI LDCTIVLAKM VVSRSTASLY GKAPGELVRT
LRIDGCRLCG HDTRVHLLEI DDAGIVRVGP PLSELAAETR L
|
|---|
| |