| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_1957 |
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| Symbol | |
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| ID | 8491964 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ammonifex degensii KC4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013385 |
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| Strand | - |
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| Start bp | 1961863 |
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| End bp | 1962990 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 646359946 |
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| Product | Tetratricopeptide TPR_2 repeat protein |
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| Protein accession | YP_003239886 |
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| Protein GI | 260893789 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATACATT TCTGGGGTAA CCCTTGGACG GCGGTGGCGC GCAGCCTCCA TCAGGGCGTC
TTCTTGCTGG CAGCAAGGGT AAGCGAAGCG GTAGGGGCCA AGCGAACGGC CCTGTGGCTT
CTGGAGAAGT TACTCGAGCG CTTTCCCCGC TACCGCCGGC TTTATCTGTG GGCGGGGCGG
CTTTGCTTTC AACTGGGGCG GCTGGAGCGG GCGCTCCGCC ACATCCTGGC GGCCTGGCCT
CGGCTAGGAG AAGAGGAACT GACGGGGGAA AGGATCGGGA CTCTGGCCGG TAATCTGCCC
CGGCGGGACG CCGCCTGGAT CCTGGCTACG GTGGGAGATT ACTGGCGGCG CAAAGGGGAG
GTGAAGCGGG CTTTATCCTT TTTCGATCGG GCCTTGGCTC AAGGTTGCGC CAGCGCGGTG
CTCCTTTCTA GCCGGGGTCT TTGCCTGCTG GCATTGGGTT CGGTGGAGGA GGCCCTGCGT
AACTTTCAGG AGGCGCGGGC TCTAGGAGGC AAGAACGCGG CCCTCTGCTT CAATACGGCT
GTGGCCTTAA GTCGCCTGGG GCGCTACGGG GAGGCTTTGC GCTACTATGA AGAAGCTAGG
CGGCTGGGAT TTGGAGGGAT GGAACTTTAC AACAACCTGG GCTTTTGCCT TTATCACCTG
CACCGCTACC AGGAGGCCGA GTCCCACTTT GCCGAGGCCT ACCGCCTGTC CTCCGGCGAT
ATCGAGATAG GGAGCAACCT GGCTGCCTGC TACCTGAAGA CGGGAAAGGC AGAGGAGGCT
TTGAAGCTTC TGGAGGATCT ACGGCAGCGG GATCCTCGCG ATCCGGTGCT GCTCAACAAC
CTGGCCTTTG CCTTGGAAAG CTGCGGCCGA AGGGAGGAGG CTCTGAAGCT ATATCAGGAG
GCGGCAGAGT TGGCCGGTGA GGACAAGAAT CATCTTTACC TTCTGAACCT AGCTTCCTGC
TTGGTGGACC TGGGGCGTTA TGCTGAAGCC CTGGCTTTGT GCCACCAACT GGCCGGGAAG
ATGAGCGACC GGCGCCTGTG GAGCTTGCGG GCCAGTATCT TGGCCGAATT AGGAGAAGTT
TCCGCAGCCA CCGAGTACTA CCGCCGGGCT CTCGGCCTCA CGGGCTAG
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| Protein sequence | MIHFWGNPWT AVARSLHQGV FLLAARVSEA VGAKRTALWL LEKLLERFPR YRRLYLWAGR
LCFQLGRLER ALRHILAAWP RLGEEELTGE RIGTLAGNLP RRDAAWILAT VGDYWRRKGE
VKRALSFFDR ALAQGCASAV LLSSRGLCLL ALGSVEEALR NFQEARALGG KNAALCFNTA
VALSRLGRYG EALRYYEEAR RLGFGGMELY NNLGFCLYHL HRYQEAESHF AEAYRLSSGD
IEIGSNLAAC YLKTGKAEEA LKLLEDLRQR DPRDPVLLNN LAFALESCGR REEALKLYQE
AAELAGEDKN HLYLLNLASC LVDLGRYAEA LALCHQLAGK MSDRRLWSLR ASILAELGEV
SAATEYYRRA LGLTG
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