| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_1294 |
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| Symbol | |
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| ID | 8491286 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ammonifex degensii KC4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013385 |
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| Strand | - |
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| Start bp | 1298401 |
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| End bp | 1299000 |
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| Gene Length | 600 bp |
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| Protein Length | 199 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 646359297 |
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| Product | Lytic transglycosylase catalytic |
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| Protein accession | YP_003239252 |
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| Protein GI | 260893155 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGGTCG GAAAGATCGA CGAGTCTTTT TCTCAAACTA AGCCTGCTTC GATGCGGCAG
GCCGAAACCC AGTCTTTTGC CGCTCTATTC CGCGAGGTCG AGGCCCGCCT GCAGCTGCCT
CCGGGACTGG TAGAGGCCGT GGCCCGGGCA GAATCGGGAT TAAACCCGCG GGCAGTCTCA
AGAGCAGGAG CAATGGGGCT CATGCAGCTG ATGCCCGGTA CGGCGCGGGC TTTGGGCGTG
ACCGACCCCT TCGACCCGGT CCAAAACGTG GAGGCGGGAG CCAGGTACCT TCGCCAACTC
CTTGACCGTT TCGGCGGAGA CTTGCGCCTT GCCCTGGCGG CTTACAATGC TGGGCCCGGC
GCTGTGGAGC GCTACCGGGG TATTCCTCCC TATCCAGAAA CCCAGGCCTA TGTGGAAAAG
GTGCTGCGGT TCCTGCAAGA AAAGCCGCTC GATACCACTC CGGTAACTGC TTCACCTGCT
TACGGCCAGG CTGCCGACCT TACCGAGGCT TTTCGGGCGG CAGCCGCGCG GGCCTATGCG
GAAGTCCTTC TGTGGCAGGC GGTGGCTGGC TCGTTTCTAG GTCTCGATTC TCTTGAATAA
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| Protein sequence | MQVGKIDESF SQTKPASMRQ AETQSFAALF REVEARLQLP PGLVEAVARA ESGLNPRAVS
RAGAMGLMQL MPGTARALGV TDPFDPVQNV EAGARYLRQL LDRFGGDLRL ALAAYNAGPG
AVERYRGIPP YPETQAYVEK VLRFLQEKPL DTTPVTASPA YGQAADLTEA FRAAAARAYA
EVLLWQAVAG SFLGLDSLE
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