| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_1262 |
|---|
| Symbol | |
|---|
| ID | 8491254 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ammonifex degensii KC4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013385 |
|---|
| Strand | - |
|---|
| Start bp | 1271212 |
|---|
| End bp | 1272174 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 646359267 |
|---|
| Product | Trans-hexaprenyltranstransferase |
|---|
| Protein accession | YP_003239222 |
|---|
| Protein GI | 260893125 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
|---|
| TIGRFAM ID | [TIGR02748] heptaprenyl diphosphate synthase component II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCTGACTT TCTGGGGGGA CCTGCGAGAA GATCTGGCCC GCGTAGAGGA GGAAATCCGA
AGGGTGGTGG CGGGCGCGCC TCCTCCTTTG CGCGAGGCGG CGCTTCACCT GCTGGCCGCT
GGGGGCAAGC GCCTGCGGCC AGCTTTGGCT TTGCTCTGTG CCCACTTCGG CCGTTACTCT
TTGGAACGGG TCCTCCCGCT GGCGGCGGCG GTGGAACTCA TCCACATGGC CACACTGGTG
CACGACGACG TGATCGACGG AGCCGAGATG AGGCGAGGCA TCCCCACGGT GCACGCCCGC
TGGGGTCCGG AGACGGCCAT CAAGGTGGGG GATGTCCTTT TTGCCCAGGC CATCGAGCTG
GTCTCCAGCT ACGAAGATTC GGCGGTAGCG CGGAAACTGG CAGCTACCTG CCTGTCCATG
TGCACAGGAG AATTTGCGCA AGAAAGAGAA AGCTACAGCC CCCAACAAAG TGTTTGGCGC
TATTTCCGGC GCATTCGCCG CAAGACAGCC CTTTTTATCG GTGCGGCCTG CGAGCTGGGG
GCCAGGGTAT GCGAGGCCCC GCTCGTGGTC TGCCAGGCCC TGAGGCAGTA CGGGTTGGCT
TTAGGAATGG CCTTCCAGGT GGTAGACGAT GTTCTCGACC TGGTGGCGGA GGAGCGGGTA
TTAGGTAAGG TGGTAGGGGG AGATATCCGC CAGGGGATAG CCACCTTGCC CGTTATCTAT
GCCTGGAGCC GGAGCAAGAA GGGACGGAGG CTTAAAGAGA TCCTCTGCAT GCGGGGGAAG
AGCGAGGCAG AGGTTCAGGA GGCTATTGCC ATAGTCAGGG AGGCTGGGGG AATAGGCTTC
AGTCTAGAAG TGGCACGGGC TTTTGCCGCC AAGGCCCTGC GTTTTCTCCG TCCCCTTCCT
GCCATACCGC AGCGCCGCCG CCTGGAGCAA ATTGCCGAGT TCGTCATCAC CCGCAGTTTT
TGA
|
|---|
| Protein sequence | MLTFWGDLRE DLARVEEEIR RVVAGAPPPL REAALHLLAA GGKRLRPALA LLCAHFGRYS
LERVLPLAAA VELIHMATLV HDDVIDGAEM RRGIPTVHAR WGPETAIKVG DVLFAQAIEL
VSSYEDSAVA RKLAATCLSM CTGEFAQERE SYSPQQSVWR YFRRIRRKTA LFIGAACELG
ARVCEAPLVV CQALRQYGLA LGMAFQVVDD VLDLVAEERV LGKVVGGDIR QGIATLPVIY
AWSRSKKGRR LKEILCMRGK SEAEVQEAIA IVREAGGIGF SLEVARAFAA KALRFLRPLP
AIPQRRRLEQ IAEFVITRSF
|
|---|
| |