| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_0782 |
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| Symbol | |
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| ID | 8490767 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ammonifex degensii KC4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013385 |
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| Strand | + |
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| Start bp | 789767 |
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| End bp | 790660 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 646358813 |
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| Product | Type II secretion system F domain protein |
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| Protein accession | YP_003238775 |
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| Protein GI | 260892678 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4965] Flp pilus assembly protein TadB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00284704 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGGTGC TGTACACGGT GGCCGTCTTG GCCTTCGGCT TCGCGTCCTT CTTCGGCGTC
CTGTGCCTCG CCCACAGGGT GTCGGGGCTG GAGGCGGCCT TCGAGAAGGG GGAGCGCCTC
CGCGTGGAGG ACGTGAGGGC CGCGCTCCTG CGCCTGCTCT CCGGCGCGCT GGAAGAGGTC
TACCGGCGCG GCAGGAGGTT CTTGCCGGTG GGCTTCTTCT GGGACGCCGG GAGGTTCAGG
GTGGCCGAGG ACTCGGGTTC TCCCCTCTCC GCCGAGGCGC TGTGCGCCCT GCACCTGGTG
GTCACCGCGT TTTTCGGCTC CTGCGCCCTC GTCTCGTGGC TCGTCGGGTC GGGCCAGCTC
GTCTTCCCCA CCCTGGCCCT CACCCTAGCG TCCCTCCTCG CCCCCTCGGT CTTCCTCGGC
CACGCCAGGG CGAAGAGGAG GGCGCGGATG GCGCGCGAGA CCCTCGCGCT GGCCGAGTTC
ACCGCCGTGG GCGTGGCCGC CGGGCTCACG CCCTGGGCGG CCCTGAAAGA GGCCGCCCAA
GGAGGGGACG GCCCCCTCTA CCGGGAAGTG AAGAGGGCCC TCGAAGAGGG GGAGGCGCAG
GCGCGGTCGG GCCCCCGCAC GGCGGTCCTG GGCGCCCTGG CGGAGGAACT GGGCGTCCCG
GAGTTCAGCT CCTTCGCCGA GCTGGTGTGC CAGGCCATCG AGTACGGGGC GGAGGGGTTC
GTGTCCGCCA TCGAGGACGC CGTGAGGCAC ATGAGGGAAG TGCGCCGGGC CAAGCTGGAA
GCGGCCGCCC AGAAGGCCCA ATCGAAGATG CTCGTCCCCC TGCTCGTCCT GGTGGGGGCC
ATGATGTGCT TCCTCCTGGG CCCCCTCTTC GCGAGGGTCG GCGCCGCGTT CTGA
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| Protein sequence | MPVLYTVAVL AFGFASFFGV LCLAHRVSGL EAAFEKGERL RVEDVRAALL RLLSGALEEV
YRRGRRFLPV GFFWDAGRFR VAEDSGSPLS AEALCALHLV VTAFFGSCAL VSWLVGSGQL
VFPTLALTLA SLLAPSVFLG HARAKRRARM ARETLALAEF TAVGVAAGLT PWAALKEAAQ
GGDGPLYREV KRALEEGEAQ ARSGPRTAVL GALAEELGVP EFSSFAELVC QAIEYGAEGF
VSAIEDAVRH MREVRRAKLE AAAQKAQSKM LVPLLVLVGA MMCFLLGPLF ARVGAAF
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