| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_0558 |
|---|
| Symbol | |
|---|
| ID | 8490533 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ammonifex degensii KC4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013385 |
|---|
| Strand | + |
|---|
| Start bp | 578441 |
|---|
| End bp | 579175 |
|---|
| Gene Length | 735 bp |
|---|
| Protein Length | 244 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 646358584 |
|---|
| Product | ABC-2 type transporter |
|---|
| Protein accession | YP_003238556 |
|---|
| Protein GI | 260892459 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACTTTT ACGCTGTTTT GTGGCGAGAA CTGGTGGTGC TCAAGCGGGG GTTCTGGAAG
TTCTTTGCCT CGCGCCTGGT GAACCCCCTC CTTTACCTCA TCGCCTTCGG CTGGGGCATA
GGCCGGAGCG TGCAAATGCC CCAGGGAAGT TACCTGGAGT TCGTGATTCC CGGGATCGTG
GCTTTAAGCG CCATGACCAC CAGTTTCGGC GCTGCGGGCA CGCCGCTTAA CATGGCCCGC
CTTTACCACA AAACCCTAGA AGAGTACTTG ATCGCGCCGG TAAGCACCTT TTCCTTCGTG
CTAGGCCGGG TGCTAGCGGC CACCCTGCGG GGCCTGATTG CCGCCCTCAT CATTCTGGGC
TTAGCCCTTC TCTTCAAGAC CAAACTGGCG ATAGGTGGGA CTTTTCTCCT GATTCTCTTC
CTTACCTGCT TCCTCTTCAG TGCTCTGGGA GTGGTGGCTG CCATGACCAT CAACTCCCAC
GAAGACATGG CCAACTTCAC CACTTTTATC ATCATGCCCA TGTCCTTCCT CTGCGGTACC
TTCTTCAGCA CCGCCAAGCT CCCTCCAGGG GTGCGGCAGC TGATCGAGAT CCTTCCCCTT
ACCCATACCA ATCTGGCCCT GCGGGAGCTC GGCACCCACG GCCCCTTTCC CTGGTTGTCA
CTGGGGGTGC TCGTCTTTTA CTCCGTTTTG TTCTTCGTCC TGGCCTGCTA CGCAGTCAAG
CACTCCCGGG ATTAA
|
|---|
| Protein sequence | MDFYAVLWRE LVVLKRGFWK FFASRLVNPL LYLIAFGWGI GRSVQMPQGS YLEFVIPGIV
ALSAMTTSFG AAGTPLNMAR LYHKTLEEYL IAPVSTFSFV LGRVLAATLR GLIAALIILG
LALLFKTKLA IGGTFLLILF LTCFLFSALG VVAAMTINSH EDMANFTTFI IMPMSFLCGT
FFSTAKLPPG VRQLIEILPL THTNLALREL GTHGPFPWLS LGVLVFYSVL FFVLACYAVK
HSRD
|
|---|
| |