Gene Adeg_0531 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAdeg_0531 
Symbol 
ID8490506 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAmmonifex degensii KC4 
KingdomBacteria 
Replicon accessionNC_013385 
Strand
Start bp549900 
End bp551735 
Gene Length1836 bp 
Protein Length611 aa 
Translation table11 
GC content62% 
IMG OID646358558 
Productsensory histidine kinase AtoS 
Protein accessionYP_003238530 
Protein GI260892433 
COG category[T] Signal transduction mechanisms 
COG ID[COG5002] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCGGTTCT CCTTCGCTTT CGGACGGCAG ATCATCGCTC TGGTAGCCCT CTTGCTGCTC 
GTCCCGGTAG CGGTGACGAT TTTCATGTTG CATACCATAA ACAAGAGCGA GGCAGCCATG
CTGGAAGCCC AGAAGCTTAA GCTCCAGCGG GTAGTGGAGC AGTTAGATGC CGGGCTTCCC
GCCGGGGGGT TTGACGTCAT GCTGGCCCAG CGGGGGGTGC CGAAAGATGC CCCCGTGCGG
GAGAAGGTGG CAGCGCTCAA TTCGGCCTTG CGGGACGTGA TCGAGCACGT GAAAGCCCAG
TATCCCGGAG TAGAGGCGGG ATTTTACTCC GCCTCTTTAG ACCGGATCAT TGACGGCTCC
CCGCAAAGCC AGGCGGGGGA GAACTTCTCC AGCCGGAGGC GGAATAACTT CTTGGAGGTC
ATGCGGGGAC GGGAAAAGAC CGAAGTGCTG GGGCCGGCCG AGGGAGGAAT CCTGGAGGTT
TACCAGCCTC TTTACCGGGA CGGCAAGATA ATAGGAGCGG TCTGGGCTAC GGAGAGTCTG
GGACACCTGG CTGCCCGGCG GCACGCGGTG CTGGCCACCG CCTACGCCAT CATCGCCCTG
GGGGTGCTGG TAGGATTCGG GGGTGCCCTG GCGGTGGTAC ACCGCTTCGT CCAGAACGTG
AATCAGATAA AGGAAGGGCT CAAGCAATTG CGCTACGATC TCTCTCGTCC CCTGAAGCCG
GCAGCGGGAG AGCTGGGGGA GATAACGGCG GCGGTGAACG AACTTGCCTC CCTGCTTCTG
CGAACCCAGC AGTACACGCG GGTGATGCTG GCCACCATCG CCGAGGGGCT GCTGGTGGTC
GACATGGAGG GGCAGATAAT GCTGGCCAAC GCCGCGGCGG TAAGGCTCTT AGGCCTGCCG
GCCGACTGGG GTGGTAAGAA TTTCCGGGAG GTGCTGCCGG TAAACACCCC TTTCGCTGAG
CTTCTGCACC TGGCTCTGAG AAAGCGCGAG GAGGTGCGCG ACCGGCTGGT GGCCTGTAAA
GGGGATGGGG GGGAGGAAAG GCAGTTGCTG GTGAGTACTG CTTTGCTCTT TGTCGAGGAG
CAGCCCATAG GGGCGGTGCT CTGCGTGCAG GACGTCACCG AACAGGTGAG GCTGCAGCGG
GAGATGCGGC GGCAGGAACG GCTGGCTTCG CTGGGCCGGC TGGTGGCCGG TGTGGCGCAC
GAGATCCGCA ACCCGCTGAC CGCCATCAAC TGCTACCTCC AGCTCTGGCA GAAAAGTGGT
CGCTTCCCGG AAAAGCCGCT TAATACCATG CGGGAGGAGA TCAACCGATT AGATAATCTG
GTAGAGAAAT TGCTCTGCCT GGCCAAGCCA GCAGAGGTGA AGAAGGTTCC CTATGAGGTT
AACCGGCTGG TGCGCGACTC TTTGCGCTTC TTCGAGGAAG TGGTGGGGAT AAGGATCGAG
ACCGATTTTG CTTCTGACCT GCCCGAGGTG CCGCTTGACC CGGAGCAGAT GGGGCGCGTC
TTGCAGAACC TCTTCTTCAA CGCCTGCGAG GCCATGGCGG GAGGAGGGGT GCTCACCGTG
CGCACTTACA AGGCGGGGGA TGGCCGGCAC GCGGTGATCG AGGTGGCGGA TACCGGCTGC
GGCATCCCGC CGGAGCACTT AAAGGAGATC TTCGAGCCTT TCTTCACCAC CAAGCCGCAG
GGTACTGGCC TGGGCCTCTC CCTGGCCAAA GAAGTGGTGG AGGCACACGG GGGCAGGATA
GAGGTAGAGA GTGAGCTGGG GAAGGGGACC ACCATGCGGA TCTACCTTCC TCTGCGGGAG
GTGAGTGTCG GTGGCGAAGC TCGTCTTGGT GGTTGA
 
Protein sequence
MRFSFAFGRQ IIALVALLLL VPVAVTIFML HTINKSEAAM LEAQKLKLQR VVEQLDAGLP 
AGGFDVMLAQ RGVPKDAPVR EKVAALNSAL RDVIEHVKAQ YPGVEAGFYS ASLDRIIDGS
PQSQAGENFS SRRRNNFLEV MRGREKTEVL GPAEGGILEV YQPLYRDGKI IGAVWATESL
GHLAARRHAV LATAYAIIAL GVLVGFGGAL AVVHRFVQNV NQIKEGLKQL RYDLSRPLKP
AAGELGEITA AVNELASLLL RTQQYTRVML ATIAEGLLVV DMEGQIMLAN AAAVRLLGLP
ADWGGKNFRE VLPVNTPFAE LLHLALRKRE EVRDRLVACK GDGGEERQLL VSTALLFVEE
QPIGAVLCVQ DVTEQVRLQR EMRRQERLAS LGRLVAGVAH EIRNPLTAIN CYLQLWQKSG
RFPEKPLNTM REEINRLDNL VEKLLCLAKP AEVKKVPYEV NRLVRDSLRF FEEVVGIRIE
TDFASDLPEV PLDPEQMGRV LQNLFFNACE AMAGGGVLTV RTYKAGDGRH AVIEVADTGC
GIPPEHLKEI FEPFFTTKPQ GTGLGLSLAK EVVEAHGGRI EVESELGKGT TMRIYLPLRE
VSVGGEARLG G