| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_0492 |
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| Symbol | |
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| ID | 8490467 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ammonifex degensii KC4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013385 |
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| Strand | + |
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| Start bp | 508947 |
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| End bp | 510620 |
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| Gene Length | 1674 bp |
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| Protein Length | 557 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 646358520 |
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| Product | Sigma 54 interacting domain protein |
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| Protein accession | YP_003238492 |
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| Protein GI | 260892395 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1067] Predicted ATP-dependent protease |
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| TIGRFAM ID | [TIGR02902] ATP-dependent protease LonB |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.335445 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACGAGG TTTTTCGCTG GACCACGCTC CTTACCCTGG TGCAGGTCTT CTTCGGTGTG
ATCATCGGTC TTTACTTCTG GAACCTCCTG CGGGCGCAGC AGAGCAGCCG GGTGGCCCTG
CGCCGGGAGC AGGCAGCAGA ACTGGAGCGG ATAAAGAAGC TACGGGCTAT TTCCCTCTCC
GAGCCCCTGG CGGAGAAGGT GCGGCCGCAG AGCTTCGCGG AGATAGTGGG CCAGGAGGAG
GCGATAAAGG CCTTGCGGGC GGCCCTTTGC GGCCCCCACC CGCAGCACGT GCTACTTTAC
GGCCCTCCCG GCGTGGGCAA GACGGCTGCC GCCCGCCTGG TGCTGGAGGA GGCCAAGCAC
AACCCCCTCT CCCCCTTCGG CAAAGAGGCC AAGTTCGTGG AGATAGACGC CACCACCGCC
CGCTTTGACG AGCGGGGTAT TGCCGATCCC CTAATCGGCT CCGTGCACGA TCCCATTTAC
CAGGGTGCCG GTCCTTTGGG AATGGCGGGT ATTCCCCAGC CCAAGCCGGG GGCGGTCACC
CGGGCGCACG GTGGCATCCT CTTCCTAGAT GAGATCGGGG AGCTACACCC CATACAGATG
AGCAAGCTTT TAAAGGTGCT GGAGGACCGC CGGGTCTTCC TGGAAAGTGC TTATTACTCT
CCCGACGACC CTAACATACC GGCCCACATC CACGACATTT TTCAAAACGG CCTCCCGGCC
GACTTCCGGC TGGTGGGGGC CACCACCCGG TCCCCAGAGG AGCTCCCGCC GGCCCTGCGC
TCCCGGTGCG TGGAGATCTT CTTCCGGCCC CTTACCCCGG AAGAGATAAA GCTTATTGCG
GCCAACGCCC TCAAGCGCCT GGGCATGGAG GTAGAAGAAG GGGTGCTGGA GGTGGTAGCC
AAGTACGCCA CCAACGGAAG GGAAGCGGTG AACATGGTTC AGCTGGCAGC GGGCTTAGCC
CTGGCGGAAG GCCGGAAGGG TATAAGAGTG GCGGACATGG AGTGGGTGGC CAGCCTGGGG
CAGTACGATC CCCGCCCCGA GCAGTGCCTG CCGGCCCAGC CTACGGTGGG TCTGGCCGTG
GGACTGGCCG TCTACGGCCC CAACCAGGGC ACGATCCTGG AGATTGAGGC GGCGGCCGTG
CCCAGGGCCA GGGGTAAGGG GAGGCTTGTC ATTACGGGAG TGGTGGAAGA AGAAGAGCTC
GGGCAGCGGG GGCGGCGCTT CCGGCGGAAG AGCACGGCCA GGAGTTCGGT GGAGAACGTC
TTGACCGCCC TGCGCGCCCT TTTGCGTGTG GAGCCGGCGG ATTATGACCT CCACGTCAAC
TTCCCAGGAG GGATGCCGGT GGACGGCCCC TCGGCGGGTT TAGCGGTGGC AGTGGCGGTT
TACTCGGCCC TAACCGGCCT TCCGGTGGAC AACCGCTCGG CCTTCACCGG TGAGGTCTCC
ATCCACGGGC AGGTAAAGCC GGTAGGAGGC ATCGTGCCCA AAGTGATGGC GGCGGCCCGG
GCGGGAGCCA GGCGGGTCTT CATCCCCCGT GAAAACTACC AGCAGCTCTT CCAGGAGTTA
GAGGGAACGA CCGTTATTCC AGTAAGCCAC CTGGAGGAAG TAGTAAAGGA AGCCTTGCTG
GCAAACAATC CCCCTACTGC CCGAACCTTC TCTGCCCTGG GAGTCAGCTT CTGA
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| Protein sequence | MDEVFRWTTL LTLVQVFFGV IIGLYFWNLL RAQQSSRVAL RREQAAELER IKKLRAISLS
EPLAEKVRPQ SFAEIVGQEE AIKALRAALC GPHPQHVLLY GPPGVGKTAA ARLVLEEAKH
NPLSPFGKEA KFVEIDATTA RFDERGIADP LIGSVHDPIY QGAGPLGMAG IPQPKPGAVT
RAHGGILFLD EIGELHPIQM SKLLKVLEDR RVFLESAYYS PDDPNIPAHI HDIFQNGLPA
DFRLVGATTR SPEELPPALR SRCVEIFFRP LTPEEIKLIA ANALKRLGME VEEGVLEVVA
KYATNGREAV NMVQLAAGLA LAEGRKGIRV ADMEWVASLG QYDPRPEQCL PAQPTVGLAV
GLAVYGPNQG TILEIEAAAV PRARGKGRLV ITGVVEEEEL GQRGRRFRRK STARSSVENV
LTALRALLRV EPADYDLHVN FPGGMPVDGP SAGLAVAVAV YSALTGLPVD NRSAFTGEVS
IHGQVKPVGG IVPKVMAAAR AGARRVFIPR ENYQQLFQEL EGTTVIPVSH LEEVVKEALL
ANNPPTARTF SALGVSF
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