| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_0355 |
|---|
| Symbol | |
|---|
| ID | 8490320 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ammonifex degensii KC4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013385 |
|---|
| Strand | + |
|---|
| Start bp | 355601 |
|---|
| End bp | 356698 |
|---|
| Gene Length | 1098 bp |
|---|
| Protein Length | 365 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 646358383 |
|---|
| Product | Radical SAM domain protein |
|---|
| Protein accession | YP_003238365 |
|---|
| Protein GI | 260892268 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1180] Pyruvate-formate lyase-activating enzyme |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGCTGTC GTATTTGTGG GAGCGAGCGT CCGACGGCCG AGGCGCTGGA CTTTATCTGC
GGTGAATGCC TTAAGGCGCA CCCTGAACTT GGCGCCGAGA CGGCTTTAAA AGCGCACTCA
CGGAGTCGCT TTCCCTTGCC GCCTTCGCCG CCGTGCACCC CTGGAGGGCT TACCTGCCAG
GTCTGCGGCA ACCGCTGCCA GCTGGGGGAG GGAGAGGTGG GTTTTTGCGG CCTGCGCTAC
TGCCGCGAGG GAAAGCTTGA ACAGGTGGCG GGAACCTCCC GGCAGGGGCT TCTGAGCTTC
TACTTCGATC CCCTCCCCAC CAACTGCGTG GCCGACTGGG TATGTCCCGG CGGTACCGGC
GCCGGCTTTC CCCGCTACGC CTACCGTCCA GGGCCGGAGG AGGGCTATAA AAACCTGGCC
GTTTTCTTGG GCGCCTGCTC CTTCGACTGC CTCTACTGCC AGAACAGCGT CTACCTCCGG
ATGACGAAAA AGAAAGCTCC CCTGGTAAGC CCAGAGGAGC TGGTAGCGGC CATCGACGAG
AAAACGGCCT GCATTTGCTT TTTCGGCGGT GACCCCTCGC CGCAGATGCC CTTTGTTCTC
CAGGTGGCCA GGCTGGCCCG TGCCAGGGCC AGAGGCCGGA TACTGCGCCT TTGCTGGGAG
ACCAACGGCA ACTTCCACCC CCGTTACCTC GACTCTATGG CGGAGCTAGC CCTGGAGTCG
GGCGGGTGCA TAAAGTTCGA CCTCAAGGCC TGGAGTGAGG ACCTGCACCG CCTGCTCGCG
GGGGTGAGCA ATCGGCAAAC ACTTGAGAAC TTTGCCTACC TGGCCCGCTT CATCCCCCAG
CGTCCCGAAC CTCCTCTTCT GGTGGCCAGC ACCCTTCTGG TGCCCGGCTA CGTGGGGGTG
GAGGAGGTGG CAGCCATTGC CCGCTTTTTG GCTGAGCTCG ATCCTTCTAT CCCCTACACC
CTCCTGGCCT TCTTCCCCCA TCACCTGATG CGCGATCTGC CACTTTTAAG CCGCAGAGAG
GCAGAGGAGT GCTATCGGGC AGCGCGGGAG GCGGGTCTTA CCAGGGTCCG GCTGGGCAAC
ATCCACCTGC TGCGCTAA
|
|---|
| Protein sequence | MGCRICGSER PTAEALDFIC GECLKAHPEL GAETALKAHS RSRFPLPPSP PCTPGGLTCQ
VCGNRCQLGE GEVGFCGLRY CREGKLEQVA GTSRQGLLSF YFDPLPTNCV ADWVCPGGTG
AGFPRYAYRP GPEEGYKNLA VFLGACSFDC LYCQNSVYLR MTKKKAPLVS PEELVAAIDE
KTACICFFGG DPSPQMPFVL QVARLARARA RGRILRLCWE TNGNFHPRYL DSMAELALES
GGCIKFDLKA WSEDLHRLLA GVSNRQTLEN FAYLARFIPQ RPEPPLLVAS TLLVPGYVGV
EEVAAIARFL AELDPSIPYT LLAFFPHHLM RDLPLLSRRE AEECYRAARE AGLTRVRLGN
IHLLR
|
|---|
| |