| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_5359 |
|---|
| Symbol | |
|---|
| ID | 8450992 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | - |
|---|
| Start bp | 5999260 |
|---|
| End bp | 5999976 |
|---|
| Gene Length | 717 bp |
|---|
| Protein Length | 238 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 645044390 |
|---|
| Product | protein of unknown function DUF541 |
|---|
| Protein accession | YP_003204612 |
|---|
| Protein GI | 258655456 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2968] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 77 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 66 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCGGTT CCCGCTACGG GCCTGGTCCA AGCAGATCGG GCCCGGCCGG GCCGAGCGGG
CCGGTGCACA CTGGGTCGGT GACTTCCGCA GAGCAGCCCG ACGGCGTCAC CGTCGTCGGA
TCCGGGACGG CGTCCGCCAC CGTCGACCGG GTGACGATCT CGCTGGCGGT CGAGGTGGTG
CGTGCCGAAC CCGGTGACGC CTGGACCGTC GCCTCCGGGA CCGCGACCCG GTTGCTGGCC
GTCCTGGCCG ACGACGGGGT CGACGCCCGG TCGGTCCGCA CGTCCGACCT GACGCTCGGT
CCGAGGTTCG ACTTCAACGG CAACCGGCAG CAGCTGGTCG GCTACCAGGC CGGGCAGCGG
CTCACCGTGG TGCGCGACGG CCTGCACGGC ATCGAGCGGA TGCTCACCGA CGTGGCCCGG
CTTGGCGGCG AGGGCGTGCG GATCGAGGGT GTCTCGCTCA CCCCCGGTCA TCCGCAGGAC
GCGCTCACCC AGGCCCGGGA CGCCGCCTTC GCCGACGCCA CCGCCAAGGC CGAGCAACTG
GCCACGCTGG CCGGCCGCCG GTTGGGGCGG GTGCGCTGGG TCGACGAGCG GCCGGCCGGC
GGCGGTCCGC GCCCGATGAT GGCCATGCGG GCGGTGGCCG CCGAGAGCAT GCCGGCGGCC
ACCGGGGACG CCGAGGTCGG CGTCACGATC ACCCTGTTCC GCGAGTTCGC GGACTGA
|
|---|
| Protein sequence | MVGSRYGPGP SRSGPAGPSG PVHTGSVTSA EQPDGVTVVG SGTASATVDR VTISLAVEVV
RAEPGDAWTV ASGTATRLLA VLADDGVDAR SVRTSDLTLG PRFDFNGNRQ QLVGYQAGQR
LTVVRDGLHG IERMLTDVAR LGGEGVRIEG VSLTPGHPQD ALTQARDAAF ADATAKAEQL
ATLAGRRLGR VRWVDERPAG GGPRPMMAMR AVAAESMPAA TGDAEVGVTI TLFREFAD
|
|---|
| |