| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_5348 |
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| Symbol | |
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| ID | 8450981 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | - |
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| Start bp | 5984743 |
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| End bp | 5985867 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 645044379 |
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| Product | periplasmic binding protein/LacI transcriptional regulator |
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| Protein accession | YP_003204601 |
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| Protein GI | 258655445 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4213] ABC-type xylose transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 62 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 62 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTCTGA AGTCCCCTGT CATGGTCGGA ATGGTGGCGG CCGGCGCGCT GCTGCTGGCC
GCTTGTGGCT CCAGCTCCTC CTCATCGGGC ACCACCTCGG CGGCGGCCTC CGGGAGCGGC
ACCAGTGCGG CGGCCTCGGG TTCGGCGGCC GGCGGCGCGA CCGGCAAGGT CGGCGTCATC
CTGCCGGACA CCAAGTCCTC CGCTCGCTGG GAGACCCAGG ACCGGCCGGC GCTGGAGAAG
GCTTTCCAGG CTGCGGGTGT CGAGTTCGAC ATCCAGAACG CCAACGGTGA CAAGGCGGCC
ATGGCCACCA TCGCCGACCA GATGATCGCC AACGGGGCGA CCGTGCTGGC CATCGTGAAC
CTGGACAACG AGTCCGGCGC GGCGATCGAG AAGAAGGCCG CCAGCCAGGG CGTGCAGACC
ATCGACTACG ACCGGCTGAC CCTCGGCGGC GGCGCGGACT ACTACGTCTC GTTCGACAAC
ACCGAGGTCG GCAAGCTGCA GGGCACCGGC CTGGCCAAGT GCCTGGGCAG CGGCGACAAG
AAGATCGTCT ACCTGAACGG CTCGCCGTCG GACTCGAACG CGACCGCGTT CTCGGCCGGC
GCGCACTCGG TGCTCGACCC GATGACCAAC TACACCGTGG TCGCCGAGCA GGCCGTGCCG
GACTGGGACA ACCAGCAGGC CGGCGTGATC TACGAGCAGA TGTACACCGC GCAGGGCGGC
AAGATCGACG GCGTGCTGGC GGCCAATGAC GGCCTGGGCA ACGCGGCCAT CGCGATCAAC
AAGAAGAACG GCCTGCAGAT CCCGGTCACC GGGCAGGACG CCACCGTCCA GGGCCTGCAG
AACATCCTGG CCGGCGACCA GTGCATGACG GTCTTCAAGG ACACCAACAA GGAGGCCGCG
GCGCTGGCCA AGGTCGCCAT CGCGCTGGCC CAGGGCCAGA CCCCGCAGAC CACCGGCACG
GTCAAGGACA CCACCGGCAA CCGGGACGTG GCCGCGATCC TGGAGACCCC GGAGGCCATC
TACAAGGAGA ACGTCAAGGA CGTCGTCACG GCCGGCGGCA CCACCGCCGC CGAACTGTGC
ACCGGCGCCT ACGCCGCCGC CTGCACCGAG CTGGGCATCA GCTGA
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| Protein sequence | MRLKSPVMVG MVAAGALLLA ACGSSSSSSG TTSAAASGSG TSAAASGSAA GGATGKVGVI
LPDTKSSARW ETQDRPALEK AFQAAGVEFD IQNANGDKAA MATIADQMIA NGATVLAIVN
LDNESGAAIE KKAASQGVQT IDYDRLTLGG GADYYVSFDN TEVGKLQGTG LAKCLGSGDK
KIVYLNGSPS DSNATAFSAG AHSVLDPMTN YTVVAEQAVP DWDNQQAGVI YEQMYTAQGG
KIDGVLAAND GLGNAAIAIN KKNGLQIPVT GQDATVQGLQ NILAGDQCMT VFKDTNKEAA
ALAKVAIALA QGQTPQTTGT VKDTTGNRDV AAILETPEAI YKENVKDVVT AGGTTAAELC
TGAYAAACTE LGIS
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