| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_5308 |
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| Symbol | |
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| ID | 8450941 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | - |
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| Start bp | 5932781 |
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| End bp | 5935657 |
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| Gene Length | 2877 bp |
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| Protein Length | 958 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 645044341 |
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| Product | Lysine decarboxylase |
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| Protein accession | YP_003204563 |
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| Protein GI | 258655407 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1982] Arginine/lysine/ornithine decarboxylases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 48 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGTCCG GGGCCGACCT GACGCGTCGG TTCCGGATCC ATACCGCAAA GGGGCGGCCG
ATGAACAGCG CGGGCACGGT ACTGCAGGGC TACAACAACC TCTCGCAGTA CCGCAAGGAC
ACCTGGTCCA CCCTGGAGGA GGCCGCCGAG CGGTTGGCCG TCGCCGCGGC CGCGGACCGC
CCGGTCGACG CCCACGCCGA CCGGGTGAGC GGCCTGCTGG AGCGGCTCAA CCCGATCGAG
CGGTACTGGG CGTTCCCCGG CCCGCAGGCC TTCCAGGCCG GCCGCCGGTT GTTCACCGCC
GGCAAGTACA CCCGGTTCGC CCGGGCCGTG GCCAGCGTCA GCCGGGCCCT GGCCAGCGAC
TCCTTCCGCA ACGGCATCCC GTGGTCGGTG GCCGCGGCCA TCACCGACAC CATGGACCAG
TCGGGCTCGA CCACCGGGAC GAGCACGCCG CAGCGGCCCT ACTTCGAGGT GCTCGTCGTC
GAGGACATGA CCGAGGCACA GGAACGGGCG CTGCGTCAGG AGCTGCGGGC CTGGCGCCGC
CCGGACGACG AGTTCATCTA CGAGATCGTC GTGGTGCCCA GCTTCGAGGA CGCGGTGATC
GCCGCCCGGA TCAACTTCAG CCTGCAGGCC TGCGTGATCA AGCGTCGGTT CGCCCAGCAT
TCGGGGCGGG ACATGTCGGC GGTGGCGCAC TTCGTCGACG ACCGCTCGCC CAACGATCTG
ATGGAGCATT CGGTCGAGGA GCGCGCCGAC CTGCTGGGCA AGGCCCTGGT CGGCATCCGG
CCCGAGCTGG ACCTGTACCT GATGACCGAG ATCACCCTGG AGGACGTCGC CGGCTGGCTC
AGCCACGACT TCCGCCGCAT CTTCCACTCC CGCGAGGGCA CGCTGGAGCT GCACCTGAGC
CTGCTCGGCG GGATCGAGGA GCGGTACCGG TCGCCGTTCT TCAACGCCCT GCAGAAGTAC
AGCCACCGGC CGACCGGTGT GTTCCACGCC CTGCCCATCT CCCAGGGCAA GTCGATCGTG
AACTCGCACT GGATCAAGGA CATGATCGAC TTCTACGGCC TGGACATCTT CCTGGCCGAG
ACCTCGGCCA CCTGCGGCGG TCTGGACTCC CTGCTGGAAC CGACCGGCCC GCTGCGTGAG
GCCCAGGACC TGGCCGCGCG CACCTTCGGG TCGCGGCAGA CCTTCTTCGC CACCAACGGC
ACCTCGACCG CGAACAAGAT CGTCTGCCAG GCCCTGGTGC AGCCCGGGGA CATCGTGCTG
GTCGACCGCA ACTGCCATCA GTCCCACCAC TACGGGCTGA TGCTCTCCGG GGCCCACGTG
ATCTACCTGG ACGCCTACCC GCTCAACGAG TACTCGATGT ACGGGGCGGT GCCGCTGCGC
TCGATCAAGG CGCAACTGCT GGAGCTGCGC CGGGCCGGCA AGCTCGACCG GGTCAAGATG
CTGATGCTGA CCAACTGCAC GTTCGACGGC ATGGTCTACG ACGCCGAGCG GGTCATGCAG
GAGTGCCTGG CCATCAAGCC CGACCTGGTC TTCCTGTGGG ACGAGGCGTG GTTCGCCTTC
GCCCGGTTCC ATCCGGTCTA CCGGCCGCGC ACCGGCATGC ACTCGGCCGG GTCGCTGCTG
GGCAAGCTGC GGGACCCGCA GTACCGCAAG GTCTTCGCCG CCTGGAACGA GCAGATCAAG
GACGCCACGG ACGCCGAGCT GCTGGATACC CGGCTCATCC CGGACCCGGC CCGGGCCCGG
GTGCGGGTGT ACGCGACCCA GTCGACGCAC AAGACGCTGA CCTCGCTGCG GCAGGGCTCG
ATGATCCACG TCTTCGACCA GGACTTCGGG CAGAAGGTCG AGGAGAACTT CCACGAGGCG
TACATGGCGC ACACCTCGAC CTCGCCGAAC TACCAGATCC TGGCCTCGTT GGACCTGGGT
CGCCGGCAGG CCGCCCTGGA GGGCTTCGAG CTGGTGCAAA AGCAGGTCGA GTACGCGATG
CGGTTGCGCG ACGCCGTCGA CAACCACCCG CTGCTGCGCA AGTACATGCG CTGCCTGACC
ACCGCCGACC TGATCCCGGC GGAGTTCCGC CCCTCGGGCA TCGGCCAGCC GCTGCGTTCC
GGCCTGAAGA ACATGCAGCT GGCCTGGCGG TCCGACGAGT TCGCGCTGGA CCCGTGCCGG
GTCACCATCT CGATCGGCGC CACCGGCATC GACGGCGACA CCTTCAAGCG CGAGTACCTC
ATGGACCGGC ACGGGGTGCA GATCAACAAG ACCTCCCGCA ACAGCGTGCT GTTCATGACC
AACATCGGCA CCACCCGCAG CTCGGTGGCC TACCTGATCG AGGTGCTGGT CAAGATCGCC
CGCGAGCTGG ACGAGAAGGT CACCGACATG AGCCTGGCCG AACGGGCGGC GCACGAGCAC
GCGGTGCGCC GGCTGACCAG TTCGTCGGCG CCGCTGCCGG ACTTCTCGTC CTTCCACGAC
GCGTTCCGGC CGAGCCCGGC CGACGATCCG GGCCCGGGTC CGGCCACTCC GGAGGGCGAC
GTGCGGCGCG CGTTCTTCCT GTCCTACGAC GACAGCCTGT GCGAGTACCT GATGCCCGAG
CTGATCCAGG AGAAGCTGGA CCGCGGCGTC GACGTGGTCT CGGCGACGTA CGTGACGCCC
TACCCGCCGG GTTTCCCGGT GCTGGTGCCC GGCCAGAAGT TCAGCCGGCA GATCCTGGAC
TACATGAACA GCCTGGATAC CTCCGAGGTG CACGGGCTGC GGGCCGATCG GGGGTACCGG
GTGTACATCG ACAAGGCCTT GGAGATCGCT CGCGAGGCAC GGGACGGTGC GTCCTCACGT
AAGGTGACCA ACGACGGCGT TCCTGACTAC TCAGCGTCAG ACTTTCAAGA TTCATAA
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| Protein sequence | MVSGADLTRR FRIHTAKGRP MNSAGTVLQG YNNLSQYRKD TWSTLEEAAE RLAVAAAADR
PVDAHADRVS GLLERLNPIE RYWAFPGPQA FQAGRRLFTA GKYTRFARAV ASVSRALASD
SFRNGIPWSV AAAITDTMDQ SGSTTGTSTP QRPYFEVLVV EDMTEAQERA LRQELRAWRR
PDDEFIYEIV VVPSFEDAVI AARINFSLQA CVIKRRFAQH SGRDMSAVAH FVDDRSPNDL
MEHSVEERAD LLGKALVGIR PELDLYLMTE ITLEDVAGWL SHDFRRIFHS REGTLELHLS
LLGGIEERYR SPFFNALQKY SHRPTGVFHA LPISQGKSIV NSHWIKDMID FYGLDIFLAE
TSATCGGLDS LLEPTGPLRE AQDLAARTFG SRQTFFATNG TSTANKIVCQ ALVQPGDIVL
VDRNCHQSHH YGLMLSGAHV IYLDAYPLNE YSMYGAVPLR SIKAQLLELR RAGKLDRVKM
LMLTNCTFDG MVYDAERVMQ ECLAIKPDLV FLWDEAWFAF ARFHPVYRPR TGMHSAGSLL
GKLRDPQYRK VFAAWNEQIK DATDAELLDT RLIPDPARAR VRVYATQSTH KTLTSLRQGS
MIHVFDQDFG QKVEENFHEA YMAHTSTSPN YQILASLDLG RRQAALEGFE LVQKQVEYAM
RLRDAVDNHP LLRKYMRCLT TADLIPAEFR PSGIGQPLRS GLKNMQLAWR SDEFALDPCR
VTISIGATGI DGDTFKREYL MDRHGVQINK TSRNSVLFMT NIGTTRSSVA YLIEVLVKIA
RELDEKVTDM SLAERAAHEH AVRRLTSSSA PLPDFSSFHD AFRPSPADDP GPGPATPEGD
VRRAFFLSYD DSLCEYLMPE LIQEKLDRGV DVVSATYVTP YPPGFPVLVP GQKFSRQILD
YMNSLDTSEV HGLRADRGYR VYIDKALEIA REARDGASSR KVTNDGVPDY SASDFQDS
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