Gene Namu_5205 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_5205 
Symbol 
ID8450836 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp5802018 
End bp5803583 
Gene Length1566 bp 
Protein Length521 aa 
Translation table11 
GC content71% 
IMG OID645044236 
Productmembrane protein-like protein 
Protein accessionYP_003204460 
Protein GI258655304 
COG category[S] Function unknown 
COG ID[COG3463] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGAGTC CCGTGCCTGA GTCCGCGGCC CCGAGCCCGC CGTTGCCGGT GCGCCGCTCG 
GTCCCGCGGG ATCGCGCGGC GGCCGGGCGG TGGGCCTGGC TGACGACCCC GCCGGGCGCC
GACGGCCTGT TCGGGCCGGT CCCCACGGCG GAGCTGAGCC GGGGCCGCCG GCTGGCGATC
TGGACCGTCA GCGTGGCCGC GTTCGTCGTC TACGCCTACG ACTCGATCCT GCGGCACCTG
CAGTACAAGA CGACCATCGA CATCACGATC TTCCAGCAGG CCATCGCCAA CTACGCCCAG
GGCCGCACCC CGAAAGTGCT GATCAAGTCC CAGGAACCGT TCAACAGCCT GGGCGATCAC
TTCACGCCGA TCATGATGGT GCTGGCGCCG TTCTACCGGA TCTGGCCGAG CGTGATGACG
CTGCTGCTGG CCCAGGCGGT GATGCTGGCC GTCGCCGTGC ACGTGGTCAC CCGGGTGGCC
GTGCGCCGGC TCGGCGGGCT GGGCTACTAC ATCGGTGTCG CGTTCGCCCT GTCCTGGGGC
GTGCTCAAGG TGCTCGACTT CGACTTCCAC GAGGCCTGTT TCACGGTCGC GTTCCTGGCC
CTGGCCCTGG AGGCGCTGCT GGACGATCGG CCGGGCCGGC TGGTGCTGTG GTGCGGCGCG
CTGCTGCTGG TCAAGGAGGA CACCCCGCTG TTCATCGCCG GCATCGGGCT GGTGGTGCTG
CTGCAGCGCC GCTGGGCCCT GGCCATCGGC CTGCTGGCCG GCTCGGTCCT GGCGTTCGGG
CTGCTGACCA TGGTGGTGAT CCCCTGGTTC AGCTACACCG GCACGTACAC CTACTTCGCG
CTGGGCTCGG CCGCGGCACC GTCCGGGCCG TTCGCGCTGG GCCAGACCGT GTTGGCCAAC
CTGTTCAGCC TCAACGGCCT GACGTTGCTG GCGGCCCTGG CCGTGACCGC GGCGCTGGGC
CTGCGCTCGC CGCTGATGCT GGTCATGCTG CCGACCCTGG TGGCCCGGTT CGCCTCGCAG
CGCGAGGTCT ACCTGGAGAT GAAGTACTAC TACGACGGCC CGCTGATGGT CGTGTGCTTC
CTGGCCCTGG CGGTGGCGAT CGCCCAGCGG CGGCAGCGCC GGGGCATCAC CCCGCAGCGG
GTGCGCGCCT TCTGGACCTC GCCGCAGGGC CTGGCCGCCG GGCTGCTGCT CGCCGTCGTC
ATCGACTACC AGGTGCACAC CACCGAGCTG CCGATCACCG TGGCGGCCTC CCGGGAGGAG
TGCCAGTTCT GCACGGCGGC CGAGCGGATC TCGGCGCAGA TCCCGGACGG GGCCCGGGTG
ATCGCCGACG CCGGGTTGCT GGGGAACTTG ACCGACCGGC ATCCGGTGCT GGTCGCCGGC
CCGGAATGGA CCGACTCCAC CCACCTGCCG CTGCAGGCCG ACTGGGTGGT GCTGCGGATG
GACTCCGGAC CGGCCGGCGC CGACACGTCC TGGTTGACCG AGCGTCGCGC CCTGCTGCTG
GCGCAGGGCT ACCGCCAGCT CGATCAACAG GGGACGCTGG TCCTGCTCCA TCGCGACTCG
TCCTGA
 
Protein sequence
MRSPVPESAA PSPPLPVRRS VPRDRAAAGR WAWLTTPPGA DGLFGPVPTA ELSRGRRLAI 
WTVSVAAFVV YAYDSILRHL QYKTTIDITI FQQAIANYAQ GRTPKVLIKS QEPFNSLGDH
FTPIMMVLAP FYRIWPSVMT LLLAQAVMLA VAVHVVTRVA VRRLGGLGYY IGVAFALSWG
VLKVLDFDFH EACFTVAFLA LALEALLDDR PGRLVLWCGA LLLVKEDTPL FIAGIGLVVL
LQRRWALAIG LLAGSVLAFG LLTMVVIPWF SYTGTYTYFA LGSAAAPSGP FALGQTVLAN
LFSLNGLTLL AALAVTAALG LRSPLMLVML PTLVARFASQ REVYLEMKYY YDGPLMVVCF
LALAVAIAQR RQRRGITPQR VRAFWTSPQG LAAGLLLAVV IDYQVHTTEL PITVAASREE
CQFCTAAERI SAQIPDGARV IADAGLLGNL TDRHPVLVAG PEWTDSTHLP LQADWVVLRM
DSGPAGADTS WLTERRALLL AQGYRQLDQQ GTLVLLHRDS S