Gene Namu_5127 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_5127 
Symbol 
ID8450758 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp5712466 
End bp5713827 
Gene Length1362 bp 
Protein Length453 aa 
Translation table11 
GC content74% 
IMG OID645044162 
Productaminotransferase class-III 
Protein accessionYP_003204386 
Protein GI258655230 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4992] Ornithine/acetylornithine aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCTC CGACCGACCG CCGCGCCGCC CTGGACCGGT ACCGGCGGCA CGTCAACAAA 
TCCTCGGCCG CGCTGGTCGA GCTGCTCGGC GCGCCGCTGC CCGAAGTGGC GCTGGGCAAT
CACCTGTACG ACGCCGACGG TGTGCGGTAC CTGGACTGTG CCGGGTTCGG TGTCAACCTG
ATCGGCCACC GGCACCCGGT GGTCGTCGAT GCGGTCAAGC GCCAGCTGGA CCGCTCACCG
CTGGTCAGCC GGCCGCTGAT CAGCCGGGTC ACGGCCGACG CCGCGGCCGC CCTGGCCGAT
GTCGCCCCGC CCGGGCTCGA CCACGTCTAC CTCACCAATT CCGGGGCCGA GGCCGTCGAG
GTCGCCCTCA AACTCGCTCG GCTGCACGGC CGCACCCGGG TCATCGCCAT GCGGGACGGC
TTCCACGGCA AGACCTTCGG CGCGCTGAGC GTCACCGGCC GGCCGGCCTA CCGGGCGCCG
TTCGAGCCCC TGCTGCCCGG CGTGGAGTTC GCCGCCTTCG GCGACATCGA CGACCTGGCC
CGGCGGCTGG CCACCGATGG CGAGCGCAGC TGCGTGCTGG CCGAACCCAT CCTCGGTGAA
GGCGGGGTGC ACGTCCCGCC GGCCGGCTGG CTGGCCGCGG TCCGGGAGCT GTGCACCCGC
ACCGGAGCCT TGCTGATCCT CGATGAGATC CAGACCGGGC TCGGCCGGAC CGGCGCCTGG
TGGGCGGCCG ACACCGAGGG CGTCGTGCCG GACATCCTGC TGTCCGGCAA GATCCTGTCC
GGCGGGGTGG TCCCGGTGGG CGCCGTGCTG GCCACCGACG CGGTGTTCCG TCCGCTGGAC
GAGGACCCGA TGCTGCACTC GTCCACGTTC GCCGGCAGCC CGCTGGCCGC CGCCGCCGTC
ACCGCAACCC TGGACGTCCT GCGCGCCGAG GGCCTGGTCG CCCGCTCGGC CGAGCTGGGC
GTCGAGCTGT CCGCGCTCGT GCGTGAGGTG CTCGCCGAGC ACTGCCCCGG CCTGGTCGCC
GAGGTCCGCG GCCGCGGGCT GCTGATCGGG ATGGACTTTG TGTCCAGCGA TCTCGCGGTG
GAATTCCTGA TGGAGCTGCT GGCCCGCCGG GTCGTGCCGT CCTACTCGTT GAACAAGTAC
AACGTGCTGC GGCTCACCCC GCCGGCCACC CTGACCGCCG CCGACGTGGC CGAGTTGCAC
GAGGCGCTGA CCGGAGCCGC CCGCGAGGTC GGCCGGCGCC GGGCCCGCGC GTCCCGCCGG
CCCGCCGCCC CCACCCGTCC CGTCCCGGCC GTCCCGCCGA TCGCCCTTCC GACCAACCCC
CCGACCGACC CCCCGACCGA GGAGTACCCG TGCGCTTCGT GA
 
Protein sequence
MTAPTDRRAA LDRYRRHVNK SSAALVELLG APLPEVALGN HLYDADGVRY LDCAGFGVNL 
IGHRHPVVVD AVKRQLDRSP LVSRPLISRV TADAAAALAD VAPPGLDHVY LTNSGAEAVE
VALKLARLHG RTRVIAMRDG FHGKTFGALS VTGRPAYRAP FEPLLPGVEF AAFGDIDDLA
RRLATDGERS CVLAEPILGE GGVHVPPAGW LAAVRELCTR TGALLILDEI QTGLGRTGAW
WAADTEGVVP DILLSGKILS GGVVPVGAVL ATDAVFRPLD EDPMLHSSTF AGSPLAAAAV
TATLDVLRAE GLVARSAELG VELSALVREV LAEHCPGLVA EVRGRGLLIG MDFVSSDLAV
EFLMELLARR VVPSYSLNKY NVLRLTPPAT LTAADVAELH EALTGAAREV GRRRARASRR
PAAPTRPVPA VPPIALPTNP PTDPPTEEYP CAS