Gene Namu_5122 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_5122 
Symbol 
ID8450753 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp5707779 
End bp5709161 
Gene Length1383 bp 
Protein Length460 aa 
Translation table11 
GC content74% 
IMG OID645044157 
ProductFAD dependent oxidoreductase 
Protein accessionYP_003204381 
Protein GI258655225 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0665] Glycine/D-amino acid oxidases (deaminating) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACCG TCCCGGCCGG ATACGAACCG TCTCCCTGGT GGTCCGGAGC CGCTCCCCAC 
CCGCGGCCGC CGCTGGTCGG CGACGTCCGG GTGGACTACG TGGTGGTCGG CGCCGGGCTG
GCCGGGCTGG CCGCCGCCTA CTTCCTGCGC CGGAACCGGC CGGACGCGAC CGTGGTGGTG
CTGGAGGCGA ACCGGGTCGG TTCCGGGGCG ACCGGGGCCA GCACCGGCAT CGTCGCGCCC
GGGGTCGGCG GGCCGATCAC CGTGCTGCGT CGCCGTTACG GCGATCGGGT GGCCGCCGCG
ACCTTCGCCG GCTCGGTCAC CGCGGTCGCC CGCACCGTCG AGCTCGTCGA GCGTGAGCAC
CTGGAGTGCG ATCTGGAGCT CAACGGCCAG CTGGTGTGCG CCGTGTCCGC GCGTCAGGAC
CGGGCCCTGC GTGCGCAGCA CCGCTCGTTC GCCGAACTGG GATTCGACAT CCCCTACCTG
CCGGCCCGGG AGCTGGCCGA ACGGTTCGGG GGCCGCCCGT ACCGGTCGGC GTTGCGACAT
CCGTTGGCCG CCACGCTCGA TCCGGTACGG CTGAGCCGGT CGCTGGCCGG CGTGCTGACC
GGGCTGGGGG TGACGATCCA CGAACGCAGC CCGGTGCTGT CGATCCGGCC GGGCGTGCCG
GTGCAGCTGC GCTGCCCGTC CGGCATCGTC CGGGCCCGGC ATGTGGTGAT GGCCACCGAC
GGCGTGCAGC CCGAGGGGCT CGGCTCGGCC GGCGTCGTCC CGATCACCGG GCACGTCATC
CGCACCGACC CGCTCACCGA CCGCCAGCTC GACCGGATCG GCTGGCTGGA CCGCGATTCG
GTGGTGGACT GCCGCACCTT CTTCAACTAC TACCGGCTCA CGCCCGACCA CCGGATCATC
ATGGGCGGCG GCCGGGTCAC CCTGCCGCCC GGGATCCGCG GCGGGGTGGG CAGTACGACC
GCCTGGAACC GCATCGAACA CGAGCTGCGG ACGATCTTCC CGGATCTCGC CTCGGTCCCG
GTCAGCAATC GCTGGTCCGG CCGCATCGGG TCGGTCCTGG ACCGGATGCC ACGGTTGGGC
CGGCTCCCGG CGGCGCCCGG GGTCTGGTTC ACCGGCGGCT GGTGCGGGCA CGGCATCCCG
CTCTCGGTCC AGGCCGGGTA CGAGATCGCC CGGCGCATCA CCGGAGTCGC CGGCCAGGAC
GACGTCGCCT GGTACCGCGA GAAGGTGCTG GCCCTGCCCG GCGGCCCACC GCGGGACTGG
GGCCTGCAGG CCTACCTGGC CGGCCTGGAC CGCCGGGACC GGATGCTACA CCACTTCGGC
GCCGTCGGCC GGGAGTTCGT GCGACCCCCG GTCAGCGCCC GGCTCAGCGG AGCCCACCGA
TGA
 
Protein sequence
MTTVPAGYEP SPWWSGAAPH PRPPLVGDVR VDYVVVGAGL AGLAAAYFLR RNRPDATVVV 
LEANRVGSGA TGASTGIVAP GVGGPITVLR RRYGDRVAAA TFAGSVTAVA RTVELVEREH
LECDLELNGQ LVCAVSARQD RALRAQHRSF AELGFDIPYL PARELAERFG GRPYRSALRH
PLAATLDPVR LSRSLAGVLT GLGVTIHERS PVLSIRPGVP VQLRCPSGIV RARHVVMATD
GVQPEGLGSA GVVPITGHVI RTDPLTDRQL DRIGWLDRDS VVDCRTFFNY YRLTPDHRII
MGGGRVTLPP GIRGGVGSTT AWNRIEHELR TIFPDLASVP VSNRWSGRIG SVLDRMPRLG
RLPAAPGVWF TGGWCGHGIP LSVQAGYEIA RRITGVAGQD DVAWYREKVL ALPGGPPRDW
GLQAYLAGLD RRDRMLHHFG AVGREFVRPP VSARLSGAHR