Gene Namu_5062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_5062 
Symbol 
ID8450693 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp5646036 
End bp5646665 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content68% 
IMG OID645044098 
Productbeta-lactamase domain protein 
Protein accessionYP_003204322 
Protein GI258655166 
COG category[R] General function prediction only 
COG ID[COG2220] Predicted Zn-dependent hydrolases of the beta-lactamase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones54 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGATCA CCAAGTACGG CCACGCGTGC CTGCACGTCG TCGACGAGGC GGCCAGCATC 
CTGATCGACC CCGGATCCTT CTCGGGTCCG TTCGAACAGA TCACCGGCCT GACCGGGGTG
CTGATCACCC ACCAGCACCC GGACCACGTT GTGCCCGACC GGCTCAAGGC GGTGCTGGCG
GCCAATCCGG CGGTCCCGCT CTACGCCGAC CCGGACACCG TCGCAGTGCT GGCCGAGCAC
GACATCGAGG CCGAGCCGGT GCGCACCGGT GACGTGCTGG ACCTGGGCAC CAGCGTCGAG
GCCACGGTGT CCGACCACGC GATCATCTAC GGCGAGCTGC CCGGCATCAC CAACGCCTGC
TACCTGATCG GCGACCGGCT GTTCCACCCC GGCGATTCGT TCACCCTGCC GGGCCGGGAC
ATCGACATCC TGGCGTTGCC GGTGTCCGCG CCGTGGATGG CCGTCAAGGA GGCCATCGAC
TACCTGCACG AGGTCGCGCC GGCCGTCGCC GTGCCGATCC ACGAGAAGGG CCTGTCCAGC
ACGGGCATGG TCTACAGCCT CATCGATCGC CTGGCCCCGG AGGTCACCCA ATGGGTGGAC
ATCGACGACG GGGAACCGCA CGACCTGTAA
 
Protein sequence
MRITKYGHAC LHVVDEAASI LIDPGSFSGP FEQITGLTGV LITHQHPDHV VPDRLKAVLA 
ANPAVPLYAD PDTVAVLAEH DIEAEPVRTG DVLDLGTSVE ATVSDHAIIY GELPGITNAC
YLIGDRLFHP GDSFTLPGRD IDILALPVSA PWMAVKEAID YLHEVAPAVA VPIHEKGLSS
TGMVYSLIDR LAPEVTQWVD IDDGEPHDL