Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_5030 |
Symbol | |
ID | 8450661 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | - |
Start bp | 5610157 |
End bp | 5612604 |
Gene Length | 2448 bp |
Protein Length | 815 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 645044067 |
Product | Osmosensitive K channel His kinase sensor |
Protein accession | YP_003204291 |
Protein GI | 258655135 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2205] Osmosensitive K+ channel histidine kinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 48 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGAACAC GGGGGCAGCT GCGCGTCTAC CTCGGCGCCG CGCCCGGGGT CGGCAAGACC TACAAGATGC TGGAGGAGGC GCACCGGCGG CTCGAGCGTG GCACCGACGT GGTCGTCGGC GTCGTCGAGG GCCACGAGCG ACCGCTGACC GAGGCGCTGC TGGTGGGGCT GGAGGTGATC CCGCGGCAGG TCCGGCCGTA CCGGGGGGCC CGCTTCGCCG AGATGGATCT GGACGCGGTG CTGGCCCGGC GACCGCAGGT CGTCCTGGTC GACGAGCTGG CGCACACCAA CGTGCCCGGG TCGCGGCACG GTAAGCGCTG GCAGGACGTC GAGGAGCTGC TGGACGCGGG CATCACCGTG ATCACCACGG TGAACATCCA GCATCTGGAG TCCCTCAACG ACGTGGTGCA GGAGATCACC GGCGTCGTCC AGCGGGAGAC CGTGCCGGAC GAGATCGTGC GTCGCGCCGA CCAGATCGAG CTGGTCGACA TGACGCCGGA GGCGCTGCGC CGGCGGATGG CCCACGGCAA CATCTACCGG CCGGACAAGG TCGACGCGGC CCTGCACAAC TACTTCCGGG TCGGCAACCT GACCGCGCTG CGCGAGCTGG GCCTGCTCTG GTTGGCCGAC AAGGTCGACG ACCAGCTCGA CCGGTACCGG GCCGACCACC ACATCACCGA CACCTGGGAG GCCCGGGAAC GGGTGGTGGT CGCGCTGTCC GGCGGGCCCG AGGGAGACAC CTTGATCCGC CGGGCCGCGC GGATCGCCGA CCGGACCAAG GGCACCGACC TGATCGCCGT CACCATCATC CGCTCCGACG GGCTGGCCGG ACCCGGACCG GCGCACCTGG CCCGGCAACG GGCCCTGGTG GAAAGCCTGG GCGGCACCTA CCACCAAGTG GTCGGCGCCG ACATCCCCAC CGCCCTGCTG GATTTCGCGC GGGGGGTGAA CGCCACCCAG CTGGTGCTGG GGGCCAGCCG GCGCGGCCGG TTCGCGCAGC TGTTCGCCCG CGGCGTGGGC GTCACCACCA CTGCCGGGTC CGGCGCGATC GACGTGCACC TGGTCACCCA CGAAAAGGCG CAGTCCGGGC GCCGGCCGCC GCGCCCGTCC TGGGCCGGGG CATTGACCCG GCGCCGGCGC GTCCTGGGCT TCGTCCTGGC GCTGGTCGGG ATGCCGCTGC TGAGCCTGGC GCTGATCGGG CTGCGCGGGC AGCTCAGCCT GCCCAGCGAC ATCCTGGCCC TGCTGCTCGG CGTGGTCGGC GTGGCCCTGG TCGGCGGCCT GCTGCCCGCG CTGGTCGCGG CGTTCCTCGG GTTCGGGCTG CTCAACTACT ACTTCGTGCC GCCGCTGCAC CAGTTCACCG TCGCCGAGGC GGAGAACCTG CTGGCCCTGC TGGCCTTCCT GCTGGTCGCG GTGGCGGTCA GTGTGGTGGT GGACCTGGCC GCCCGACGCA CCGGGCAGGC GTCCCGGGCC CAGGCCGAGG CGGCGACGTT GTCCACCCTG GCCGGCAGCG TGCTGCGCGG GGAACGCCCG TTGCCCGCGC TGCTGGAACA GGTGCGGGAG ACGTTCGGCC AGGACAGCGT GACCCTGCTG GAGCGGCACC CGGACACCGT CGCCGGGCCG GACCTGCGGC GCGACCAGCG GGCCTGGTCG GTCGCGGCCT GGGTCGGCGA ATCGCCGAGC ACCGCCCCGG CTCAGGGTGT CGAGGTCGCC GTCAACGACG AGGTGTCCCT GGTCCTGCGC GGCCCGGCGC TGGCGGCCGC CGACCAGCGC ATCGTGGAGG CGTTCGGCGC CGAAGCGGCC GTGGCCCTGC GCCAGCAACG GCTGTCCGAG CAGGCCGCGG CGGTCGTCCG GCTCACCGAG GTGGACCGGC TGCGGACCGC GCTGCTCACG GCCGTCGGTC ATGACTTCCG CACCCCGCTG GCCGCCGCCA CTGCCGCCGT GACCAGCCTG CGCAGCTCGG ACGTCACGTT CGGGCCGCAG GACCGGGACG AGCTGCTGGC CACCGCGGAG GAGTCGCTGG CCCGGCTGAG CCGGTTGGTG GAGAACCTGC TGGACATGAG CCGGTTGCAG GCCGGGGCGC TGGCCATGCA CCTACAGCCG ATCGGCGTGG CCGAGTTGGT TCCGATCGCC GTCGACGACC TGGGCGAGGC GGGTCGCGCC GTGCAGGTCC GCGACGCCGA CGACGTGCCC GACGTGACCG CCGACGCCGC CCTGCTGGAA CGGGTGCTGG CCAACGTCAT CGCCAATGCG GTCCGGCACA GCCCCCGGAC CGGCCGCCGA TGGTCACCGT CAGCGAGCAC GACGGGCGGG TCGAGGTGCG CGTCATCGAC CACGGCCCGG GTATTGCCGC GCAGGACTAC GACCGGGTGT TCCTGCCGTT CCAGCGGCTC GGCGACCGCG ACAACACCAG CGGCCTCGGT CTGGGCCTGG CGCTGTCCCG CGGACTGA
|
Protein sequence | MGTRGQLRVY LGAAPGVGKT YKMLEEAHRR LERGTDVVVG VVEGHERPLT EALLVGLEVI PRQVRPYRGA RFAEMDLDAV LARRPQVVLV DELAHTNVPG SRHGKRWQDV EELLDAGITV ITTVNIQHLE SLNDVVQEIT GVVQRETVPD EIVRRADQIE LVDMTPEALR RRMAHGNIYR PDKVDAALHN YFRVGNLTAL RELGLLWLAD KVDDQLDRYR ADHHITDTWE ARERVVVALS GGPEGDTLIR RAARIADRTK GTDLIAVTII RSDGLAGPGP AHLARQRALV ESLGGTYHQV VGADIPTALL DFARGVNATQ LVLGASRRGR FAQLFARGVG VTTTAGSGAI DVHLVTHEKA QSGRRPPRPS WAGALTRRRR VLGFVLALVG MPLLSLALIG LRGQLSLPSD ILALLLGVVG VALVGGLLPA LVAAFLGFGL LNYYFVPPLH QFTVAEAENL LALLAFLLVA VAVSVVVDLA ARRTGQASRA QAEAATLSTL AGSVLRGERP LPALLEQVRE TFGQDSVTLL ERHPDTVAGP DLRRDQRAWS VAAWVGESPS TAPAQGVEVA VNDEVSLVLR GPALAAADQR IVEAFGAEAA VALRQQRLSE QAAAVVRLTE VDRLRTALLT AVGHDFRTPL AAATAAVTSL RSSDVTFGPQ DRDELLATAE ESLARLSRLV ENLLDMSRLQ AGALAMHLQP IGVAELVPIA VDDLGEAGRA VQVRDADDVP DVTADAALLE RVLANVIANA VRHSPRTGRR WSPSASTTGG SRCASSTTAR VLPRRTTTGC SCRSSGSATA TTPAASVWAW RCPAD
|
| |