Gene Namu_5030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_5030 
Symbol 
ID8450661 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp5610157 
End bp5612604 
Gene Length2448 bp 
Protein Length815 aa 
Translation table11 
GC content73% 
IMG OID645044067 
ProductOsmosensitive K channel His kinase sensor 
Protein accessionYP_003204291 
Protein GI258655135 
COG category[T] Signal transduction mechanisms 
COG ID[COG2205] Osmosensitive K+ channel histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAACAC GGGGGCAGCT GCGCGTCTAC CTCGGCGCCG CGCCCGGGGT CGGCAAGACC 
TACAAGATGC TGGAGGAGGC GCACCGGCGG CTCGAGCGTG GCACCGACGT GGTCGTCGGC
GTCGTCGAGG GCCACGAGCG ACCGCTGACC GAGGCGCTGC TGGTGGGGCT GGAGGTGATC
CCGCGGCAGG TCCGGCCGTA CCGGGGGGCC CGCTTCGCCG AGATGGATCT GGACGCGGTG
CTGGCCCGGC GACCGCAGGT CGTCCTGGTC GACGAGCTGG CGCACACCAA CGTGCCCGGG
TCGCGGCACG GTAAGCGCTG GCAGGACGTC GAGGAGCTGC TGGACGCGGG CATCACCGTG
ATCACCACGG TGAACATCCA GCATCTGGAG TCCCTCAACG ACGTGGTGCA GGAGATCACC
GGCGTCGTCC AGCGGGAGAC CGTGCCGGAC GAGATCGTGC GTCGCGCCGA CCAGATCGAG
CTGGTCGACA TGACGCCGGA GGCGCTGCGC CGGCGGATGG CCCACGGCAA CATCTACCGG
CCGGACAAGG TCGACGCGGC CCTGCACAAC TACTTCCGGG TCGGCAACCT GACCGCGCTG
CGCGAGCTGG GCCTGCTCTG GTTGGCCGAC AAGGTCGACG ACCAGCTCGA CCGGTACCGG
GCCGACCACC ACATCACCGA CACCTGGGAG GCCCGGGAAC GGGTGGTGGT CGCGCTGTCC
GGCGGGCCCG AGGGAGACAC CTTGATCCGC CGGGCCGCGC GGATCGCCGA CCGGACCAAG
GGCACCGACC TGATCGCCGT CACCATCATC CGCTCCGACG GGCTGGCCGG ACCCGGACCG
GCGCACCTGG CCCGGCAACG GGCCCTGGTG GAAAGCCTGG GCGGCACCTA CCACCAAGTG
GTCGGCGCCG ACATCCCCAC CGCCCTGCTG GATTTCGCGC GGGGGGTGAA CGCCACCCAG
CTGGTGCTGG GGGCCAGCCG GCGCGGCCGG TTCGCGCAGC TGTTCGCCCG CGGCGTGGGC
GTCACCACCA CTGCCGGGTC CGGCGCGATC GACGTGCACC TGGTCACCCA CGAAAAGGCG
CAGTCCGGGC GCCGGCCGCC GCGCCCGTCC TGGGCCGGGG CATTGACCCG GCGCCGGCGC
GTCCTGGGCT TCGTCCTGGC GCTGGTCGGG ATGCCGCTGC TGAGCCTGGC GCTGATCGGG
CTGCGCGGGC AGCTCAGCCT GCCCAGCGAC ATCCTGGCCC TGCTGCTCGG CGTGGTCGGC
GTGGCCCTGG TCGGCGGCCT GCTGCCCGCG CTGGTCGCGG CGTTCCTCGG GTTCGGGCTG
CTCAACTACT ACTTCGTGCC GCCGCTGCAC CAGTTCACCG TCGCCGAGGC GGAGAACCTG
CTGGCCCTGC TGGCCTTCCT GCTGGTCGCG GTGGCGGTCA GTGTGGTGGT GGACCTGGCC
GCCCGACGCA CCGGGCAGGC GTCCCGGGCC CAGGCCGAGG CGGCGACGTT GTCCACCCTG
GCCGGCAGCG TGCTGCGCGG GGAACGCCCG TTGCCCGCGC TGCTGGAACA GGTGCGGGAG
ACGTTCGGCC AGGACAGCGT GACCCTGCTG GAGCGGCACC CGGACACCGT CGCCGGGCCG
GACCTGCGGC GCGACCAGCG GGCCTGGTCG GTCGCGGCCT GGGTCGGCGA ATCGCCGAGC
ACCGCCCCGG CTCAGGGTGT CGAGGTCGCC GTCAACGACG AGGTGTCCCT GGTCCTGCGC
GGCCCGGCGC TGGCGGCCGC CGACCAGCGC ATCGTGGAGG CGTTCGGCGC CGAAGCGGCC
GTGGCCCTGC GCCAGCAACG GCTGTCCGAG CAGGCCGCGG CGGTCGTCCG GCTCACCGAG
GTGGACCGGC TGCGGACCGC GCTGCTCACG GCCGTCGGTC ATGACTTCCG CACCCCGCTG
GCCGCCGCCA CTGCCGCCGT GACCAGCCTG CGCAGCTCGG ACGTCACGTT CGGGCCGCAG
GACCGGGACG AGCTGCTGGC CACCGCGGAG GAGTCGCTGG CCCGGCTGAG CCGGTTGGTG
GAGAACCTGC TGGACATGAG CCGGTTGCAG GCCGGGGCGC TGGCCATGCA CCTACAGCCG
ATCGGCGTGG CCGAGTTGGT TCCGATCGCC GTCGACGACC TGGGCGAGGC GGGTCGCGCC
GTGCAGGTCC GCGACGCCGA CGACGTGCCC GACGTGACCG CCGACGCCGC CCTGCTGGAA
CGGGTGCTGG CCAACGTCAT CGCCAATGCG GTCCGGCACA GCCCCCGGAC CGGCCGCCGA
TGGTCACCGT CAGCGAGCAC GACGGGCGGG TCGAGGTGCG CGTCATCGAC CACGGCCCGG
GTATTGCCGC GCAGGACTAC GACCGGGTGT TCCTGCCGTT CCAGCGGCTC GGCGACCGCG
ACAACACCAG CGGCCTCGGT CTGGGCCTGG CGCTGTCCCG CGGACTGA
 
Protein sequence
MGTRGQLRVY LGAAPGVGKT YKMLEEAHRR LERGTDVVVG VVEGHERPLT EALLVGLEVI 
PRQVRPYRGA RFAEMDLDAV LARRPQVVLV DELAHTNVPG SRHGKRWQDV EELLDAGITV
ITTVNIQHLE SLNDVVQEIT GVVQRETVPD EIVRRADQIE LVDMTPEALR RRMAHGNIYR
PDKVDAALHN YFRVGNLTAL RELGLLWLAD KVDDQLDRYR ADHHITDTWE ARERVVVALS
GGPEGDTLIR RAARIADRTK GTDLIAVTII RSDGLAGPGP AHLARQRALV ESLGGTYHQV
VGADIPTALL DFARGVNATQ LVLGASRRGR FAQLFARGVG VTTTAGSGAI DVHLVTHEKA
QSGRRPPRPS WAGALTRRRR VLGFVLALVG MPLLSLALIG LRGQLSLPSD ILALLLGVVG
VALVGGLLPA LVAAFLGFGL LNYYFVPPLH QFTVAEAENL LALLAFLLVA VAVSVVVDLA
ARRTGQASRA QAEAATLSTL AGSVLRGERP LPALLEQVRE TFGQDSVTLL ERHPDTVAGP
DLRRDQRAWS VAAWVGESPS TAPAQGVEVA VNDEVSLVLR GPALAAADQR IVEAFGAEAA
VALRQQRLSE QAAAVVRLTE VDRLRTALLT AVGHDFRTPL AAATAAVTSL RSSDVTFGPQ
DRDELLATAE ESLARLSRLV ENLLDMSRLQ AGALAMHLQP IGVAELVPIA VDDLGEAGRA
VQVRDADDVP DVTADAALLE RVLANVIANA VRHSPRTGRR WSPSASTTGG SRCASSTTAR
VLPRRTTTGC SCRSSGSATA TTPAASVWAW RCPAD