| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_4963 |
|---|
| Symbol | tynA |
|---|
| ID | 8450594 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | - |
|---|
| Start bp | 5545872 |
|---|
| End bp | 5547803 |
|---|
| Gene Length | 1932 bp |
|---|
| Protein Length | 643 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 645044001 |
|---|
| Product | tyramine oxidase |
|---|
| Protein accession | YP_003204225 |
|---|
| Protein GI | 258655069 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3733] Cu2+-containing amine oxidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 43 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCCCGTC ATCCACTCGA CTCTCTCAGC GCTGAGGAGT TCCGTCGCAC CACCGGGGCG
TTGCGGGCGT CCGGCGACCT GGTGCCGACC CGTCGGTTCG CCTCCATCAC CCTGGACGAG
CCGGCCAAGG CGGACGTGCT GGCCTGGCGG GAGGGCGACC CGATCGTGCG GCGCTCCCTG
TCGGTGCTGT GGGACCGGGC CGACAACAAG ACCTACGAGG CGATCGTCGA GCTCGCCGAG
TCCGGCGCGG ACGCGGACCG GGTGGTCTCC TTCACCCACA TCCCGGGCGT CACGCCCAAC
TTCACCCCGG ACGAGTGGCA CGACTGCGAG GTCGCCATGA AGGCGAACCC CGACGTGGTC
GCGGCTCTGG CCGAGCGCGG TCTGACCGAC CTGGACCTGG TCCTGATCGA CGTCTGGACC
TACGGCAAGG CGTTGATGCC GGAGAAGTAC CGGGACCGGC GGCTGGGCTG GGCCGACATC
TGGGTGCGCT CGAGCCCGAC CGGCAATCCC TACGCCAACC CGGTCTCCGG GATGAAGCTG
ATCGTGGACA TGAACACGAT GGAGCTGCTG GAGATCGACC GGGCCGACGT CGTTGCCGCC
CCGGCCCCGG TGATGGGCGA GTACGAGCCG GCCCTGGTGC CCGGCCAGAC GCTGCGCGAG
GACATCAAGG CGCTGGACAT CATCCAGCCC GACGGCCCCT CGTTCGAGGT CGACGGCAAC
GTCATCAAGT GGCAGAACTG GACGTTCCGG CTGGCCTTCA ACTACCGCGA GGGCCCGGTC
ATCCACCAGG TCAGCTACAA CGACCACGGC ACCGAGCGGG ACATCGCCTA CCGGATGTCG
TTCGCCGAGA TGATCGTGCC GTACCGGGAC GCCAGCTTCG ATCACTACCG GCGCACCGCC
TACGACATCG GCGAGTGGGG CATCGGCTAC ATGACCCAGT CGCTGGAGCT CGGCTGCGAC
TGCCTGGGCG AGATCCGTTA CGTAGACGCG GTGCTCACCG ACTCGCTGGG CGAGCCGGCG
ACCATCAAGA ACGCCATCTG CCTGCACGAG GAGGACAACG CGGTCCTGTG GAAGCACGTG
GACTCGATCA ACGGCCGGGC CGAGGTGCGC CGGGCCCGGC GGATGGTCGT CTCGATCCAC
GCCACCGTGG CCAACTACGA GTACCTGGTC TACTGGCGCT TCTACCAGGA CGGCAACATC
GAGTGCGAGG TCCGGGCGAC CGGGATCATG GTCACCACCC CGATCCCCGA GGGCGAGCCG
ACGCCGCGGA CCGGCACCCT GGTCGACCAC CGCACCTACG CGCCGTTCCA CCAGCACTTC
CTGGTCGCCC GGCTGGACCT GGACGTGGAC GGGCAGCACA ACAGCGTGGT GGAGAGCGAT
TCCTACGCGC TGCCGGTCGG GCCGGACAAC CCGCACGGGC TGTCGGTGGT GACCGAGGCG
ACCGTCATCG AGTCCGAGGC GCAGTCGGCG CGGGACTTCA ACTACGAGCG GCAGCGCGGC
TGGAAGGTGG TCAACCCGAA CAAGACCAAC GCCTTCGGCA CCCCGGTGGC CTACAAGCTG
GTGCCCGGCG CGGCGTTCCC GGTGATGATG GAACCGACCA CCGCGCAGTA CCTGCGGGCC
CCGGTGATGG GTCACACGCT CTGGGTCACC AAGCATCATG ACGACGAGAA GTGGCCGGCC
GGAACCTATC CCACGCAGAG CGAGACCGAC GACGGGCTGA CCCGGTGGAT CGCCGACGAC
GAGTCGCTGG TCAACACCGA CGTGGTGCTC TGGTACGTGT TCGGCATCCA CCACATCACC
CGGGTCGAGG ACTGGCCGAT CATGCCGGTG GACACCATCT CGTTCTGGCT CAAGCCGTTC
GGCTTCTTCG ACCGGAACCC GTCCCTGGAC GTGCCGCCGC AGCCGGGCTC GGGGGATCAC
TGCCACACCT GA
|
|---|
| Protein sequence | MSRHPLDSLS AEEFRRTTGA LRASGDLVPT RRFASITLDE PAKADVLAWR EGDPIVRRSL
SVLWDRADNK TYEAIVELAE SGADADRVVS FTHIPGVTPN FTPDEWHDCE VAMKANPDVV
AALAERGLTD LDLVLIDVWT YGKALMPEKY RDRRLGWADI WVRSSPTGNP YANPVSGMKL
IVDMNTMELL EIDRADVVAA PAPVMGEYEP ALVPGQTLRE DIKALDIIQP DGPSFEVDGN
VIKWQNWTFR LAFNYREGPV IHQVSYNDHG TERDIAYRMS FAEMIVPYRD ASFDHYRRTA
YDIGEWGIGY MTQSLELGCD CLGEIRYVDA VLTDSLGEPA TIKNAICLHE EDNAVLWKHV
DSINGRAEVR RARRMVVSIH ATVANYEYLV YWRFYQDGNI ECEVRATGIM VTTPIPEGEP
TPRTGTLVDH RTYAPFHQHF LVARLDLDVD GQHNSVVESD SYALPVGPDN PHGLSVVTEA
TVIESEAQSA RDFNYERQRG WKVVNPNKTN AFGTPVAYKL VPGAAFPVMM EPTTAQYLRA
PVMGHTLWVT KHHDDEKWPA GTYPTQSETD DGLTRWIADD ESLVNTDVVL WYVFGIHHIT
RVEDWPIMPV DTISFWLKPF GFFDRNPSLD VPPQPGSGDH CHT
|
|---|
| |