| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_4896 |
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| Symbol | |
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| ID | 8450526 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | - |
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| Start bp | 5460569 |
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| End bp | 5462419 |
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| Gene Length | 1851 bp |
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| Protein Length | 616 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 645043934 |
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| Product | transcriptional regulator, CdaR |
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| Protein accession | YP_003204159 |
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| Protein GI | 258655003 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3835] Sugar diacid utilization regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCACCG TCGGGCCGGC CCTGGACGAG TTGCGCCGGT GGCTCAGCGC GGTCGATCGG
CTGGCCCTGG CGGTGACCTC CCCCGGGGAA CTGCCCGCCG TGCTGGATCT GGTCGCCGAC
ACCGCCCGCG ACCTGCTCGG CTACGACTTC TGCGCCGTGC TGCTGCCCGA CCCGACCGGG
ACCCATCTGT TGATCACCGG CTGGAGCGGG TTGTCCGAGG ACTACGTGGC CAGTGTGAAC
GCGGACCGTC CGGTGCAGCT CGCACTGAAC GGCAGCGGCC AGGCGCCGTC GGGCCGGGCC
TTCTCCTCGG GCCGGACGGT GGCGATCAGC GACATCGCCG CCGAGCCGGA GTTCGTCCCG
TGGGGCGGGG TGGCCCGGGA CCAGGGGTAC CGGGCGATGG TGTCGGTCCC GTTGATCGCC
GACGGCGCCG TGCTGGGCAC GCTCAACGGC TACCGGGCCC ACGTCCACGA CTTCGACGGC
GACGAGGTCG AGCGGCTCAC CCTGCTGGCC AACCACGCCG CGCTGGCGCT GACCTCGGCG
CGGCTGGTCG ACCGGCTCCG GGACCAGGCC GAGCTGCTGA CCAAGTCCGA ACGGATCCAC
GGGCAGCTGC TGGACGTCGC CCTGGGCGGT GGCGGCCTGC CCGGCATCGT GCACGCCCTG
GCCGAGCTGA TCGGCCAACC GGTGGTGATC GAGGACGCCG ACGGCCAGGT CTCGGCAGTG
GCCGGTGGGG CCGCCGAGCT GCCCCCACCC GAGCTGCGCG CGGCGGCCTC CGGCGACGCG
GTGGCCGACG GGGCCGAGGT GGCCGGTCGC CACGTCTGGA CGGTGTGGGT GGCCGGGGAC
GTGGCCGCCC GGCTGTGGGT CGGGCCCGGG CACCTGTCGG CGCTGGACCG GCGCGCGGTC
GAGCACGGCT CGCTGGTGCT GTCCCTGGAA CTGGCCCGGA TCCGGACTGC CGTCGAGGTC
GAGCTGCGGC TGCGGGGGGA GCTGCTCACC GACGTGCTCG GCGGGGCGGC GGCCGACTCG
CCGGCGGTCC GGGACCGGGC CGCACGACTC GGCCACGACC TGTCCGGCCC GGCGGTCGTC
GTGGTCGGCC GGGTGGAGCC GGCCGATCCG GCGCGGCGCA TCCTGCTCGA GCAGCGGGTG
CTGGCCGCGG CGGCCGATCT GGCCGCCCGG TTCCATCCCC GCCCGCTGGT TGGGACGTAC
CGGGGGGTGC TGGCGGTGTT GTGGCCGGCG GCCCTGACCG ACCCCGTCCC CGACCCCGCC
CGCGGCACGG GTAGCGGCCC GGGCCCGGGG ACGGGCGCCG GGGCGGGCGG GCGGCTCGAC
GCACGGATCG GGGCGGGGAC AGGTGGCCGG GTGGGGGAGG CGGTGCGCCG GGCGCTGCGG
TCGGTGCCGG GGGTGGCGGC GGCCACCGTC TGCGTCTCGC CACCGGCGGC CGACTACCCG
CTGGCCTTCC GGATGGCCCG CGGAGGTCTG GAGATCGGCC TGGCCGGCGG CCGGATCGAC
ACCGCGATCA CCCTTGACGA CCTCGGGGTG GCCGGCCTGC TGCTGCAGGT GGACGACCCG
GGCCCGCTGG TCGCCTTCGC CGACCGCACC CTGGCCCCGG TCCGCCGGCA CGACGCGCAG
CGGGGCACCC AGTTGCTGGA CACCCTGCGC TGCTACCTGG CCGCCCGACA GAACCGGGCC
GCCACCGCGC AGGCGCTGCA CCTGCACCCG AACACGGTGA CCCAGCGCCT GCAGCGCGTG
GAGTCGCTGA CCGGGTTGGA GCTGGCCGAC CCGGAGGCAA TGGTGCAGGT GCGGGCCGCG
TTGACCGTGC TGGACGTGGC CGGCTTCCGG TTCGAGGACG GTGAACCGTG A
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| Protein sequence | MITVGPALDE LRRWLSAVDR LALAVTSPGE LPAVLDLVAD TARDLLGYDF CAVLLPDPTG
THLLITGWSG LSEDYVASVN ADRPVQLALN GSGQAPSGRA FSSGRTVAIS DIAAEPEFVP
WGGVARDQGY RAMVSVPLIA DGAVLGTLNG YRAHVHDFDG DEVERLTLLA NHAALALTSA
RLVDRLRDQA ELLTKSERIH GQLLDVALGG GGLPGIVHAL AELIGQPVVI EDADGQVSAV
AGGAAELPPP ELRAAASGDA VADGAEVAGR HVWTVWVAGD VAARLWVGPG HLSALDRRAV
EHGSLVLSLE LARIRTAVEV ELRLRGELLT DVLGGAAADS PAVRDRAARL GHDLSGPAVV
VVGRVEPADP ARRILLEQRV LAAAADLAAR FHPRPLVGTY RGVLAVLWPA ALTDPVPDPA
RGTGSGPGPG TGAGAGGRLD ARIGAGTGGR VGEAVRRALR SVPGVAAATV CVSPPAADYP
LAFRMARGGL EIGLAGGRID TAITLDDLGV AGLLLQVDDP GPLVAFADRT LAPVRRHDAQ
RGTQLLDTLR CYLAARQNRA ATAQALHLHP NTVTQRLQRV ESLTGLELAD PEAMVQVRAA
LTVLDVAGFR FEDGEP
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