| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_4864 |
|---|
| Symbol | |
|---|
| ID | 8450494 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | - |
|---|
| Start bp | 5424260 |
|---|
| End bp | 5424970 |
|---|
| Gene Length | 711 bp |
|---|
| Protein Length | 236 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 645043902 |
|---|
| Product | transcriptional regulator, TetR family |
|---|
| Protein accession | YP_003204127 |
|---|
| Protein GI | 258654971 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGACCA CCGCGGGCGA ACCGCCGGCC GGGCGAGCGG CGGCCCTGCC CCGGGTGAGC
GTGGCCGATG TCGCCGTCCG GATGTTCGCC GAGCAGGGCT TCCAGGCCAC CTCGGCCACG
GCCATCGCCG AGGCGGCCGG CGTCTCGCGC AGCACGTTCT TCCGGCAGTT CCGGTCCAAG
GACGACGTCA TCTTCGCCGA TCACGACGAG CTGCTGGACG CCATCGGCGA GTTCCTGGCC
CGGGACCACG GCGACCCGTA CTGGGCCGTC TGCGAGGCCG CGACCATGGT CTTCCGGCGC
TTCCGGGACC GGCTGCCGAT CGTGCAACTG CGGGACCGGG TGGTGCGGCA GACGCCGGAG
CTGCGGGACC GCGAGCTGGT CACCATCAGC CGGTACGAGC GGCTGTTCGC CAGCCACCTG
CGGCGGCGCC TGCCGCACGA GCCGCCGCTG ATCGCGATCC GGTTCGCGGC CGTGGTGACG
GCCACCCACA ACTACGAGCT GCGCCGGCTG CTGCGCTCAC CCGACCCGGT GGACGAGCAG
GAGCTGACCG CCGCCCTCGA CGAGGTGCGC GCCCTGTTCG GGGTGGGCCC GACGGCCGGC
GCGGCCGGGT CGGCGCCCGA CATCATGGTC GCGGTGTTCC CGGCCGCCAC CTCGCCCGAG
CGGGTGGCGG CCGTGGTCCG CGAGCACCTG ACCGAAGCCC GCTCCGGCTG A
|
|---|
| Protein sequence | METTAGEPPA GRAAALPRVS VADVAVRMFA EQGFQATSAT AIAEAAGVSR STFFRQFRSK
DDVIFADHDE LLDAIGEFLA RDHGDPYWAV CEAATMVFRR FRDRLPIVQL RDRVVRQTPE
LRDRELVTIS RYERLFASHL RRRLPHEPPL IAIRFAAVVT ATHNYELRRL LRSPDPVDEQ
ELTAALDEVR ALFGVGPTAG AAGSAPDIMV AVFPAATSPE RVAAVVREHL TEARSG
|
|---|
| |