| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_4861 |
|---|
| Symbol | |
|---|
| ID | 8450491 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | - |
|---|
| Start bp | 5420508 |
|---|
| End bp | 5421338 |
|---|
| Gene Length | 831 bp |
|---|
| Protein Length | 276 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | 645043899 |
|---|
| Product | modification methylase, HemK family |
|---|
| Protein accession | YP_003204124 |
|---|
| Protein GI | 258654968 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG2890] Methylase of polypeptide chain release factors |
|---|
| TIGRFAM ID | [TIGR00536] HemK family putative methylases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 0.707131 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.983858 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGTCAT CGGCCGAGCC GGGTTCCGCC GGCTCGATCC CCCCGGCCGG GGTGGTGGCG
GCGCTGCGCG GCGCCGGCTG CGTGTTCGCC GAGCAGGAGG CGCAGCTGCT GCTGGCGGCG
GCGGACGGCC CGGCGGAGCT GGCTCGACTG GTCCGGGCCC GGGTCGCGGG CACCCCGCTG
GAGTACCTGG TCGGCTGGGT CGAGTTCGAC GGGCTGCGAA TCGCCGTGAC CGACGGGGTT
TTCGTGCCGC GGCAGCGCAG CCGGCTGCTC GTGCGGGCGG CCGTGGGGCA CCTGGCCGGA
CGGCCGGAGC CGCTGGTGGT CGAGCTGTGC TGCGGCTGCG GCGCGATCGG GCTGGCCATC
GCCGCGGCCG TGCCCGGGGT CCGGCTGCAC GCTGCGGACA TCGATCCGGT GGCGGTGGGC
TGCGCCCGGT CCAACCTGGC CCCGATCGGC GCCGCGGTGT ACGCGGGCGA TCTGTTCGCG
GCGCTGCCCG GCCGGCTGCG CGGCGCCGTC GATGTGCTCG TCGCCAACGC GCCCTACGTG
CCCACCGCAG CTATCGCGTT GATGCCGCCG GAGGCTCGGG ACCACGAACC CGGGATCGCC
CTGGACGGCG GGCCGGACGG CACGCGCGTG CTGCGCCGGG TCATTGCCGG TGCCGTGGCC
TGGCTGGCCC CGGACGGCGT CCTGCTGGTG GAGGTCGGGA CCAGCCAGAT CCCTCTGATC
ACCACGGCTT TCACCGCGGC GGGGCTGGCC CCTCAGATCG TCCGGGACGA AGAGCTCGGG
GCCACGGTGG CTCTCGGACG GCCTGCGGCC GCCGGAGCCG GCCGCGCCTG A
|
|---|
| Protein sequence | MESSAEPGSA GSIPPAGVVA ALRGAGCVFA EQEAQLLLAA ADGPAELARL VRARVAGTPL
EYLVGWVEFD GLRIAVTDGV FVPRQRSRLL VRAAVGHLAG RPEPLVVELC CGCGAIGLAI
AAAVPGVRLH AADIDPVAVG CARSNLAPIG AAVYAGDLFA ALPGRLRGAV DVLVANAPYV
PTAAIALMPP EARDHEPGIA LDGGPDGTRV LRRVIAGAVA WLAPDGVLLV EVGTSQIPLI
TTAFTAAGLA PQIVRDEELG ATVALGRPAA AGAGRA
|
|---|
| |