Gene Namu_4659 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_4659 
Symbol 
ID8450288 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp5180907 
End bp5181710 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content75% 
IMG OID645043699 
Productpeptidase C60 sortase A and B 
Protein accessionYP_003203925 
Protein GI258654769 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3764] Sortase (surface protein transpeptidase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCCGG TCGCCTCCGA GCAGGGCGCA CGCCCGCCCG GGGATCAGCG ACCGGACCAC 
TCCCGCCGCC GGGCCGCCAC CAGCCTGGCG GCGGGAGTCC TGCTGATCCT GGCGGCTGGC
CTGCTCTGGT GGGTCAGCCG CCCGGAACCG GCCGGCCAGA CGGTGAGTTC GGTCGGTGCC
TCGGGGGCGC TCGAACTCAC CGGGCCGACG TCCGCCGGCT CGGCCTCGCC GGTCGAACCG
ATCGCGCCGG CCGAACCCAC CGAGCCGGCC GCACCTTCCG CGCCGCCCAG CCCGGCGGCC
GCCCCCGCCG CCCCACCGGC CGATCAGCCC GCCCCGGCCG CCGCCCCGGA CCCGGTCATC
GCCGATCCGA CCCGGCTGCA GATTCCCGCG TTGGCCGTCG ATGCGCCGGT CGAGCCGGTC
GGGGTCGCCG ACGACGGTGA GATCGAGGTG CCCGGTGACG TGGCCACCGT CGGCTGGTAC
CGGTTCGGAC CGGCGCCGGG TGCAACGGGA TCGGCGGTGC TGGTCGGTCA CGTCGACGAC
TACCGCCAGG GTGCCGGCGT GTTGGCCCGG ATCGGCGACC TGAACCCGGG TGACACCATC
GCCGTCGCCG GCCCGGATGG GACCGTGCGG CAGTTCTCCG TCGTCGCCCG GGAGCAATGG
GCCAAGGCCG ACACGCCGTT GGATCGGCTG TTCGACCGCG GCGGCGAGGC CCGGTTGGTG
CTGATCACCT GCGGTGGTCG GTTCGACCAG GCCAGCCTGA GTTACGACGA CAACATCGCG
GTCACCGCGG TGCCGGTCGC GTGA
 
Protein sequence
MTPVASEQGA RPPGDQRPDH SRRRAATSLA AGVLLILAAG LLWWVSRPEP AGQTVSSVGA 
SGALELTGPT SAGSASPVEP IAPAEPTEPA APSAPPSPAA APAAPPADQP APAAAPDPVI
ADPTRLQIPA LAVDAPVEPV GVADDGEIEV PGDVATVGWY RFGPAPGATG SAVLVGHVDD
YRQGAGVLAR IGDLNPGDTI AVAGPDGTVR QFSVVAREQW AKADTPLDRL FDRGGEARLV
LITCGGRFDQ ASLSYDDNIA VTAVPVA