Gene Namu_4618 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_4618 
Symbol 
ID8450246 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp5135343 
End bp5136779 
Gene Length1437 bp 
Protein Length478 aa 
Translation table11 
GC content55% 
IMG OID645043659 
Producthypothetical protein 
Protein accessionYP_003203886 
Protein GI258654730 
COG category[L] Replication, recombination and repair 
COG ID[COG0210] Superfamily I DNA and RNA helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.359899 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGAAG CGCTATCCGC GGTTGCTCAC GAGATAGTCG GGAGTTTGCC CGCATCGGTC 
GAAATGCCTG CGGGCACCGA CAAGACACAG ATCGTCGCCG CTTTAGCTGC TGTAGGTGCC
GAAACAGGAC GCCGGACTCT GGTCTTAACG CATACTCATG CTGGGGTCGA TGCTATTAGG
CGACGGCTCC AACGCTTCGG CGTACCGCGA AATATGGTCC ATGTTGACAC GATTGCTGGC
TGGGCCTTCG ACCTCGTCCG CAGCTACCCG CTGCTCGCTG GTGTAAACAT ACCTCAGGAT
CCAAACTGGT CGAGAAGCAA GGACTACGTT GAAGGCGCTA CTCGCGTCGT CTTATCGGAT
GCGATACAGG CCGTGCATGC CGCCAGTTTC GATTATCTCG TGATAGACGA ATACCAGGAC
TGCGTCGTAT CACAGCATGA GTTTATTCGA GCGCTTTGTG TATCCATCCC CAAGGCGTGT
GTTCTGGGTG ATCGGTTGCA GGGCATATTC AGGTTCGGTG ACGAGGATCT TATCGCCTGG
GACGACAACC TCAGTCAATT GTTCCCTCCA GTAACATTGA CTCATACACC TTGGCGTTGG
GCAGCCGTGA ATCCCGCGCT CGGACAATGG TTGCTAGATG TACGGCCCGG CCTGCTGCGC
CACAACCCAT TGGTTATAGA CACCAGTGTC GTTGGGGTTT CCTGGTACCA ACGCCAGCCG
AACTACGCCA ACCTCGCCAC TGAAGCGTCA CGATTGGTGT CGTTAGGTGG AAGTGTACTG
ATTATCGGCA AATGGCCTTC TGATTGCGCG AGCATCGCCG GCCGGGTCTA CGGCTTTGGA
GTGATGGAGG AGCTGCAAGG AAAATTCATG GAGCAGTTCT TGACTAAGTT GGATTCCGCG
CGAGACCGAC GAAGCTGGGC TAGCTTGCTC GCTAAGTTCG CTAAAGATTG CTTCGTTGGC
CTCGCAGGGC TCGACGCGGC GATCCTAGGA AAACTCAACC GTTTCCAAGC AGTAGGCCAC
CTGAGCCGAA CCGGCTTGGC CGAGGTGTTA GTGTCTCTTG ATAGAGTCGT CCAGTCCCCG
AGTCATCGAT CTGTTGTTGA AGCGATGCAA GCGATTGAGG CCGTCAGGGG TATAAGGTTG
ATTCGCTTGG AAGCCTGGCA TGACACGAAG CGAGTATTGG CTCTGGACGC CGATACGAGA
GATGAGCCAA CCCCTCCCCA CTTGGCGCGT ATCCGAGATC ATGTCCGTCG GGTTGGTCGT
CAGGCGAGTA GTCGAAGCGT GTCCCGAACA TTGCTGGTCA AGGGTCTTGA GTTCGATCAT
GTGATAGTGG CCGATGCTGA CGGTCTGGGC GACTACGAGA ATCTCTATGT CGCAATCACG
CGAGCCTGCA GGACGCTAAC AGTATTTAGT TCATCTCAAA CTCTGCGATA CACCTAA
 
Protein sequence
MDEALSAVAH EIVGSLPASV EMPAGTDKTQ IVAALAAVGA ETGRRTLVLT HTHAGVDAIR 
RRLQRFGVPR NMVHVDTIAG WAFDLVRSYP LLAGVNIPQD PNWSRSKDYV EGATRVVLSD
AIQAVHAASF DYLVIDEYQD CVVSQHEFIR ALCVSIPKAC VLGDRLQGIF RFGDEDLIAW
DDNLSQLFPP VTLTHTPWRW AAVNPALGQW LLDVRPGLLR HNPLVIDTSV VGVSWYQRQP
NYANLATEAS RLVSLGGSVL IIGKWPSDCA SIAGRVYGFG VMEELQGKFM EQFLTKLDSA
RDRRSWASLL AKFAKDCFVG LAGLDAAILG KLNRFQAVGH LSRTGLAEVL VSLDRVVQSP
SHRSVVEAMQ AIEAVRGIRL IRLEAWHDTK RVLALDADTR DEPTPPHLAR IRDHVRRVGR
QASSRSVSRT LLVKGLEFDH VIVADADGLG DYENLYVAIT RACRTLTVFS SSQTLRYT