Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Namu_4609 |
Symbol | |
ID | 8450237 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nakamurella multipartita DSM 44233 |
Kingdom | Bacteria |
Replicon accession | NC_013235 |
Strand | - |
Start bp | 5128851 |
End bp | 5129720 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 645043650 |
Product | transcriptional regulator, LysR family |
Protein accession | YP_003203877 |
Protein GI | 258654721 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 51 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.461419 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGCTGC ATCAGTTGCG GTACTTCCTG GCCGTCGTCG ACGAGGGATC CTTCAGCGCC GCCGCCCAGG CGGTGCGGAT CAGCCAGTCG GGGGTCAGCA CCCAGATTCA GAAGCTGGAG CGGGAACTGG GCGTCAGCCT GATCGACCGA TCGCCCCGCC GGGTGACCCT GACCCCGGCC GGGCGCGCGC TGCTCCCGGC GATCCGGTCG GTGCTGACCG CGGTGGCGCA GGTGAGTGCC ACCGCCCACG ACCTGCGCGG GCTGGTGGTC GGGTCGCTGC GGATCGGCAC CGTCACCGGG CTGGCCTGGC CGCGGCTGGT GGACGCCTTG GCGGCGCTGC ACACCCGGCA CCCCGGGGTC GATCTGCGCC TGCACGAGGG CAATTCCGAC GACCTGGTCG CCGGCGTGCG GGACGGCCGC CTGGACATCG CCGTCGCCGG GTGGGCCGGC GAGCCGCCGC CCGGGCTGCC CTCCCGCATC GTCATCGACG ACGCCCTGGT CGCGATCGTC GCGCCGGGCC ACCGGTGGGC GGATCGGGCC GCCGTCGACC CGGGGGAGCT GGGCGTCGTC GACCTCATCG CCCTGCCCGC CGGCACCGGC GCCCGGACCG CCCTGGATGC CGTGCTGGCC CGCGCCGGCG CTGCGGCGGA CCCACGCTGG GAGGTGTCGG CGCCGGCCAC CGTGCGGATG CTGGCCGCCC GCGATCTGGG GGTCGGCGTG CTCAGCGCGA CGACCTGCGC CGGCTGGGAC GACGTGGTGG CCTTGCCGAT CGACGACCCG CTGGCCCGGT CCCGGTTCGG CCTTCTCTGG TCGGCGCGGC CCGGCCGAGC CGCCCGCGCC CTTCTGCAGC AGCTCGATCC GGACTTATGA
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Protein sequence | MELHQLRYFL AVVDEGSFSA AAQAVRISQS GVSTQIQKLE RELGVSLIDR SPRRVTLTPA GRALLPAIRS VLTAVAQVSA TAHDLRGLVV GSLRIGTVTG LAWPRLVDAL AALHTRHPGV DLRLHEGNSD DLVAGVRDGR LDIAVAGWAG EPPPGLPSRI VIDDALVAIV APGHRWADRA AVDPGELGVV DLIALPAGTG ARTALDAVLA RAGAAADPRW EVSAPATVRM LAARDLGVGV LSATTCAGWD DVVALPIDDP LARSRFGLLW SARPGRAARA LLQQLDPDL
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