| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_4545 |
|---|
| Symbol | |
|---|
| ID | 8450173 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | + |
|---|
| Start bp | 5054449 |
|---|
| End bp | 5055672 |
|---|
| Gene Length | 1224 bp |
|---|
| Protein Length | 407 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 645043586 |
|---|
| Product | L-carnitine dehydratase/bile acid-inducible protein F |
|---|
| Protein accession | YP_003203813 |
|---|
| Protein GI | 258654657 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAACGGCG GTCCCCTGTC CGACATCGTC GTCGTCGACC TCACCCGGGC CCTGGCCGGA
CCGCATGCCG CGATGATGCT GGCCGACCTC GGCGCCCGGG TGATCAAGGT GGAGACCCCG
GGCGGCGGTG ACGACACCCG GGGCTGGGGT CCGCCGTTCG TGGCTCGCAG CGAGACCGGC
CTGACCACGG AAATTCCTTC CGCGGAAGGC ATCTCGACGT ATTTCCTGTC CTGCAACCGG
AACAAGGAAT CGATCACCCT CGACCTGAAG AGCGCCGCCG GCACGCAGGC GCTGACCGAG
CTGGTCCGGC GCGCCGACGT GCTGCTGGAG AATTTCCGGC CGGGCGTGCT GGACCGGCTG
GGCTTCCCGC TGGACCGGCT GACCGAGCTC AACCCGGGCC TGGTGATGCT GTCCATCTCC
GGCTTCGGCC ACGACGGCCC CGAGGGCGGG CGGGCCGGCT ACGACCAGAT CGCCCAGGGC
GAAGCCGGTC TGATGTCGAT GACCGGCCCG GACCCGCAGA CCCCGACCAA GGCCGGGGTG
CCGATCGCCG ACCTGCTGGC CGGCATGTAC GGCGCCTACG GCGTGGTCGC CAAGCTGACC
GAGCGGGCCC GCACCGGCCG CGGTGGCCTG GTCCGGACCT CGTTACTGGC CAGCGTCGTC
GGCGTGCACG CCTTCCAGGG CACCCGCTGG ACGGTGGCCG GCCAGATCCC GCAGGCCGAG
GGCCCGCACC ACCCGTCGAT CTGCCCGTAC GGCCTGTTCC ATTCGGCCGA CGGCACCGTG
CAGATCGCGG TGGGCTCGGA GGGGCTGTGG CAGCGGCTGG CGCCGGCCTT CGGGCTGCCG
CTGGATGCCC CCGGGTTCGC CACCAACGCC GACCGGGTCC GCAACGGCCC GGCCGTCCGG
GCCGCGGTGA ACGAGGCCTT CGCCGCCCAC ACCACCGCGG ACCTGCTGGC CACGCTGGCC
GAGATCGGCG TGCCCAGTGG CGAGGTGAAG AACCTGCAGC AGGTCTACGA CTGGGAGCAG
GCCCGGTCCC AGGGCTTGCT GATCGATGTC GAGCACCCGG TGCTGGGCCC GGTCCAACTG
CCCGGGCCGC CGCTGCGCTT CTTCGACGGC GCCGGCCAGG AGTGGCACCG GGAGCACACC
GCTCCCCCGC TGCTGGGCCA GCACACCGAC GAGGTCCTGG GCTGGCTGGC CGACGCGGGC
GACCCGATCG ACGGCACCGG CTGA
|
|---|
| Protein sequence | MNGGPLSDIV VVDLTRALAG PHAAMMLADL GARVIKVETP GGGDDTRGWG PPFVARSETG
LTTEIPSAEG ISTYFLSCNR NKESITLDLK SAAGTQALTE LVRRADVLLE NFRPGVLDRL
GFPLDRLTEL NPGLVMLSIS GFGHDGPEGG RAGYDQIAQG EAGLMSMTGP DPQTPTKAGV
PIADLLAGMY GAYGVVAKLT ERARTGRGGL VRTSLLASVV GVHAFQGTRW TVAGQIPQAE
GPHHPSICPY GLFHSADGTV QIAVGSEGLW QRLAPAFGLP LDAPGFATNA DRVRNGPAVR
AAVNEAFAAH TTADLLATLA EIGVPSGEVK NLQQVYDWEQ ARSQGLLIDV EHPVLGPVQL
PGPPLRFFDG AGQEWHREHT APPLLGQHTD EVLGWLADAG DPIDGTG
|
|---|
| |