| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_4392 |
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| Symbol | |
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| ID | 8450018 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | - |
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| Start bp | 4874283 |
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| End bp | 4875038 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 645043439 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003203668 |
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| Protein GI | 258654512 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.276744 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCAGG TTCGGGTCGC GGTGGTCACC GGCGGCGGCA CCGGGATCGG CCGGGCGGCC
GCGCTCGCGC TGGCCGCCGA CGGCTGGCGG GTGGTGCTGG TCGGGCGGCG GCCGGGTCCG
CTGGACGACG TCGTCGCCGA CGGGGCGTCG CTGCCCGGGT CCCTGGTGGC CCGGCCGGCC
GACGTCACCG ACGAGGCGTC GGTGGTCGGT GTGTTCGACG GCGCGGTGGC CGACTTCGGC
CGGGTCGACC TGCTGTTCAA CAACGCCGGG ATGTTCGCGC CGTCCCGGGA CCCGGACGAG
ATCCCGCTGG CCGAATGGTC CGCGGTGGTC GCGGTGAACC TGACCGGCGC GTTCCTGTGC
GCCCGGGAGG CGTTCCGGGT GATGAAGGCG CAGGACCCGC AGGGCGGCCG GATCATCAAC
AACGGCTCGA TCTCGGCGCA TACCCCACGG GTGCGGGCGC TGGCCTACAC GACCACCAAG
CACGCGATCA GCGGACTGAC CAAGTCGCTG TCGCTGGACG GCCGGCCCTA CGACATCGCC
TGCGGGCAGA TCGATATCGG CAACGCGGCC ACCGACCTGA CGGCCCGGTG GGGGGAGGGC
ACCCCGCAGC CGCACGGCGG CCTGATGGTC GAACCGACGA TGGACGTGCG GGAGGTGGGC
CGCGGGGTGG CGTTCATGGC CTCGTTGCCG TTGGCGGCCA ACGTGCCGAC CATGACGGTG
ATGGCGACCA AGATGCCGTT CGTCGGCCGG GGCTGA
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| Protein sequence | MQQVRVAVVT GGGTGIGRAA ALALAADGWR VVLVGRRPGP LDDVVADGAS LPGSLVARPA
DVTDEASVVG VFDGAVADFG RVDLLFNNAG MFAPSRDPDE IPLAEWSAVV AVNLTGAFLC
AREAFRVMKA QDPQGGRIIN NGSISAHTPR VRALAYTTTK HAISGLTKSL SLDGRPYDIA
CGQIDIGNAA TDLTARWGEG TPQPHGGLMV EPTMDVREVG RGVAFMASLP LAANVPTMTV
MATKMPFVGR G
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