| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_4301 |
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| Symbol | |
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| ID | 8449927 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | - |
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| Start bp | 4783238 |
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| End bp | 4784341 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 645043349 |
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| Product | succinyl-diaminopimelate desuccinylase |
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| Protein accession | YP_003203578 |
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| Protein GI | 258654422 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01900] succinyl-diaminopimelate desuccinylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.673976 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.667956 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCGGATG TGTCCGTCCC CGCCTCCACC CCGACCGTGC CCGCCGCCCG CTTGGACCTT
CGGTCCGACC CGGCCCAGCT GACCGCGACC CTGGTCGACA TCCCGTCGGT GTCCGGCACC
GAGGGGCCGA TCGCCGACGC CGTCGAGGCC GCGTTGCGGG CGCTGCCGCA CCTGCAGGTG
CAGCGGCTCG GCAACAGCGT GCTGGCCCGG ACCGACCTGG GCCGGCCGAC CCGGATCATG
CTGGCCGGCC ACCTGGACAC GGTGCCGATC GCCGACAACG TGCCTTCCCG GCGGGACGGC
GACATCCTGC ACGGCTGCGG GACCACGGAC ATGAAGTCCG GCGACGCGAT GCTGCTGCAC
CTGGCGGCCA CGCTGCCGGA CCCGGCCCGC GATCTGACCT TCGTGTTCTA CGAGTGCGAG
GAGATCGAGT ACGACCGCAA CGGCCTGACC CGGATCCAGG CCGAGCAGCC GCAGTGGCTG
GCCGCCGACC TGGCCATCCT GGCCGAGCCG ACCAACGGCA ACGTCGAGGC CGGCTGCCAG
GGCACGCTGT CCGCGACCGT GACGGTCCGC GGTCGCCGGT CCCACTCGGC CCGGTCGTGG
CTGGGCGACA ACGCCATCCA CAAGACCGGT GTCGTGATGG ACCGGCTCGC CGCCTGGGAC
GCCCGCATCG TGGACATCGA CGGCTGCCAG TACCGGGAGG GCCTGAACGC GGTCGGCATC
ACCGGCGGTG TGGCCGGCAA CGTCATCCCC GACGAGTGCA CGGTCCGGGT CAATTTCCGG
TTCGCGCCCG ACCGCAGCCC GGACGAGGCG GCCACCACCC TGGTCGAGCT GTTCCCCGAG
TTCGAGGTGA CCGTGCTGGA CGTGGCCGCG GGGGCCCTGC CAGGTCTGTC GGCGCCGGCC
GCCGCCGAGT TCGTCGTCGC CGCCGGCGGC CGGGCCCAGG CCAAGTTCGG CTGGACCGAC
GTCGCCCGGT TCGCCGCGCT GGGCATCCCG GCGGTCAACT ACGGACCCGG CGACCCGTCC
CTGGCGCACA CCCGCGAGGA GCACGTCAGC ATGAGCCAGA TCCGCGAGAT GACCGACGTG
TTGCGGCGGT TCCTGGCCGG CTGA
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| Protein sequence | MPDVSVPAST PTVPAARLDL RSDPAQLTAT LVDIPSVSGT EGPIADAVEA ALRALPHLQV
QRLGNSVLAR TDLGRPTRIM LAGHLDTVPI ADNVPSRRDG DILHGCGTTD MKSGDAMLLH
LAATLPDPAR DLTFVFYECE EIEYDRNGLT RIQAEQPQWL AADLAILAEP TNGNVEAGCQ
GTLSATVTVR GRRSHSARSW LGDNAIHKTG VVMDRLAAWD ARIVDIDGCQ YREGLNAVGI
TGGVAGNVIP DECTVRVNFR FAPDRSPDEA ATTLVELFPE FEVTVLDVAA GALPGLSAPA
AAEFVVAAGG RAQAKFGWTD VARFAALGIP AVNYGPGDPS LAHTREEHVS MSQIREMTDV
LRRFLAG
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