Gene Namu_4289 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_4289 
Symbol 
ID8449915 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp4771089 
End bp4772171 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content76% 
IMG OID645043337 
ProductAlcohol dehydrogenase GroES domain protein 
Protein accessionYP_003203566 
Protein GI258654410 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases 
TIGRFAM ID[TIGR01202] 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.70382 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAGCA CCACCCTGCC GACCAGCACG CCCACCGGAC CGGTTTCCGC CCCGGCTCCC 
CGGCCGACCA CCACCCGGGC CGCCGTGCTG CACGGCGCCG GTGACCTGCG CACCACCGAG
CTGCCGATCC CCGCTCTGGG ACCGGACGAC GTCCTGATCC AGGTGGCCGC GGTCGGGGTG
TGCGGATCGG ACATGCACTA CTTCGCGCAC GGCCGCAACG GCACCAATGT GTTGCGCCAG
CCGACCGTGC TGGGGCACGA GGCCGCCGGC ACCGTGGTCG CCGCCGGCGC CGCCGCCCCG
GTCGCGGTCG GCACGGCGGT GGCGGTCGAG CCTGCCGTCG GCTGCGGCAC CTGCCGCACC
TGCCGGGAGG GCGACTACAA CGTGTGCCCG ACCGGACGGT GCTTCGGCTC CCCGCCCACC
CACGGGGTGA TGACCCAGTA CCTGCTGGCC CCGGCCCGGG CCGTGCACCC GCTGCCCGAC
CAGATCGACC TGGTCACCGG CGCCCTGATC GAACCCCTGG CCGTCGCGGT CTGGGCCGTG
CGGCGGGCCC AGGTGGGCCT GGGCCACCGG GTGCTGGTCA CCGGAGCCGG CCCGATCGGC
CTGCTGGTCG CCCAGGTGGC CCGGGCCGCC GGCGCCGCTG AGGTCACCGT GACCGACGTC
AACGACGACC GGCTGGCCGT CGCCGCCGCC CTGGGCGCCA CCCACACCCG CAACACCCGC
ACCGCCCCGC TGGTCGAGGA ACCCACCTAC GACCGGGTGC TGGACTGCAC CGGGGTGCCG
GCGGTGGTGT GGTCGGCCAT CCGCACGGTG CGGCCGCACG GCCGGGTCAC CGTCGTCGGT
CAGGCGGCGC CCACCGTCGA CGGCCTGCCG CTGGGCTACC TGCAGCGCTA CGAGATCGAC
CTGGTCACCG CCTTCCGCTA CGCCCACGCC TTCCCCACCG CGATCGCCCT GGCCGCCTCC
GGCGCGGTCG ACATCACCCG CCTGATCACC GGCCGCTTCC CGCTCGACCA GGCCGCTCTG
GCCGTGCAGG CCCCCGGCAC CGATCCCCGG CACCTCAAGG TCCTGGTCCT GCCCCAGTCC
TGA
 
Protein sequence
MTSTTLPTST PTGPVSAPAP RPTTTRAAVL HGAGDLRTTE LPIPALGPDD VLIQVAAVGV 
CGSDMHYFAH GRNGTNVLRQ PTVLGHEAAG TVVAAGAAAP VAVGTAVAVE PAVGCGTCRT
CREGDYNVCP TGRCFGSPPT HGVMTQYLLA PARAVHPLPD QIDLVTGALI EPLAVAVWAV
RRAQVGLGHR VLVTGAGPIG LLVAQVARAA GAAEVTVTDV NDDRLAVAAA LGATHTRNTR
TAPLVEEPTY DRVLDCTGVP AVVWSAIRTV RPHGRVTVVG QAAPTVDGLP LGYLQRYEID
LVTAFRYAHA FPTAIALAAS GAVDITRLIT GRFPLDQAAL AVQAPGTDPR HLKVLVLPQS