Gene Namu_4244 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNamu_4244 
Symbol 
ID8449870 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNakamurella multipartita DSM 44233 
KingdomBacteria 
Replicon accessionNC_013235 
Strand
Start bp4719237 
End bp4720100 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content75% 
IMG OID645043293 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_003203522 
Protein GI258654366 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.142484 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATCA TCATCACCGG CGGGACCGGT TTCATCGGCA GTGCTGTGCT GGATCGTCTC 
CTCGCCCGCG ACCACGACGT CATCGCCCTC GTCCGCAGCG ATCAGGCGGC CGCCGCCGTG
GCCGGCCGCG GGGCCACTGC GGTCATCGGC GACCTCACCG ACCCGGATTG GCTGACCGGG
CACCTCGCGC ACGGCGACGG GGCCATCCAT GCCGCCGCGG CCGGCGACGG CACCGACGCC
GACCTCGACG CCGGCGTCGT CAAGGCGGTC GGCCATGCGT TCGGCGGCAC CGGCCGCCCC
TACCTGCACA CCGGCGGCAT CTGGCTCTAC GGCGCCAACC GGCACATCAC CGAGCAGTCC
CCGGTCGACC CGCCGGCCAT CGTGGCCTGG CGGGTGCCGG TCGAGCAGTC CCTGCTCGGC
GCGGACGTGG CTGCCACGGT GGTCGTCCCC GGGATCGTCT ACGGCCACGG CCGCGGCATC
CCGGCCCTGG TCGCCGGCGG TCCGCGCACT GAGGACGGCG CCCTGACCCT GATCGGCGAC
GGCCGGCAGC ACTGGGTGAC CGTGCACGTC GACGACCTGG CCGAGCTGTA TGTGCAGCTG
CTTGAGCAGG GCTCGGGCTT CGGTCACGTC GTCGCCGCCG CGCCGGGCAA TCCGACCGTG
CGTGAGCTGG CCGCGGCGGT GGCCGGCCCG GCCGGGGTGG CGGCCCAGGA CGTCGCCGGC
ACCCGGGCCC GGTTGGGCGC TTCGTTCGCC GACGCGTTGC TGATCGACCA GGGCGCGGAC
GCGGCCCGGG CCCGGGCGCT GGGCTGGGCG CCGCGACGAC CCAGCCTGCT GGACGAGTTC
ACCCGGGGGT CCTACGCCGG GTGA
 
Protein sequence
MKIIITGGTG FIGSAVLDRL LARDHDVIAL VRSDQAAAAV AGRGATAVIG DLTDPDWLTG 
HLAHGDGAIH AAAAGDGTDA DLDAGVVKAV GHAFGGTGRP YLHTGGIWLY GANRHITEQS
PVDPPAIVAW RVPVEQSLLG ADVAATVVVP GIVYGHGRGI PALVAGGPRT EDGALTLIGD
GRQHWVTVHV DDLAELYVQL LEQGSGFGHV VAAAPGNPTV RELAAAVAGP AGVAAQDVAG
TRARLGASFA DALLIDQGAD AARARALGWA PRRPSLLDEF TRGSYAG