| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_4239 |
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| Symbol | |
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| ID | 8449865 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | - |
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| Start bp | 4712374 |
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| End bp | 4713993 |
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| Gene Length | 1620 bp |
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| Protein Length | 539 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 645043288 |
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| Product | PfaD family protein |
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| Protein accession | YP_003203517 |
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| Protein GI | 258654361 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
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| TIGRFAM ID | [TIGR02814] PfaD family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.354626 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTCGACA AGGCTCCGGC CGTGCCACTG GGCGGCTGGA CCGGGCCGAT AACGCCGGCT
TTTGGGCCGA ACGAGGTCGC CGCGCTCACG CACCGTATCC GGGACACCGC GTTCGTCGTC
GTCAACCCGG CGACCGGCGC GCACGGCGTC GTCACGCAGG GTGCTGCGGT GCCGGCGGAG
ACGCCGGGTG CGCTGCGACT GGTCGGGGTG CTGCCGCCGC TGTACCCGGA GTGGCTCGGT
GACCGGAACT TCACCCAGAC CCACGGGGTC CGTTTCCCCT ACGTCGCCGG GGAGATGGCC
AACGGCATCG CCACCACGAC GATGGTCATC GAGATGGCCC GCCACGGCTA CCTGGGCTTC
TTCGGGGCGG CCGGGTTGGA CGCCGGCCGG GTCGGCGCCG CGATCGACGA GTTGCACGCC
GCCCTGGGCC GCGAGTCCAC GGCGTGGGGG AGCAACCTGA TCCACTCGCC GAACGAACCG
GCCCTCGAAG AGGCCGTGGC CGAGCTGTAT CTGACCCGTG GGGTGCGCAA AGTATCGGCC
AGCGCGTACA TGTCGCTCAC CCCGGCGATC GTGCGGTACG CCTACACCGG CGTCCGGGTC
GACGCTTCCG GCACCATCCA CCGGCCGAAC ATGGTCTTCG CCAAGGTGTC CCGGCCCGAG
GTGGCCCGGC AATTCCTGGA ACCGGCACCG GCGGCGATGC TGGCCGGGCT GGTCGACGCC
GGCCGGCTCA CCCCGGACGA GGCGCGGCTG GCCGCCGGGC TGCCGGTCGC CGAGGACATC
ACCGTGGAGA GCGACAGTGG CGGCCACACC GACAACCGGC CGCTGGCGCC GCTGTTCGCC
GCCATCGCCG CCGTCCGCGA CGAGGTGGTG GCGGCCCGCG GGTACCGGCG TCCGGTTCGG
TTGGGCGCCG CCGGCGGGAT CGGCACCCCG CAGGCGGTGG CCGCGGCCTT CGCCCTGGGC
GCGTCCTACG TGCTGACCGG GTCGGTCAAC CAGGCCTGCG TCGAGGCCGG GATCGCGGCC
GACGCCAAAG CCATGCTGGC CGCCGCGGAC ATCGCCGACG TCACGATGGC ACCGGCCGCC
GACATGTTCG AGCTCGGGGT GTCCCTGCAG GTGCTGCGGC GGGGGACCAT GTTCGCGAGC
CGCGCCCGCA AGCTCTCCGC GCTCTATCGC GCGCATCCCA GCCTGGAGGC GATCGCCCCG
GCGGAGCTGG CCGCCCTGGA GAAGCAGATC CTGGGCCAGT CCGTCGCCGA CTGCTGGACG
CAGACCCGCG CGTTCTGGCT GGAGCGGGAC CCCGAGCAGG TCAGCCGGGC CGAGGCCGAC
CCGCGGCACC GGATGGCGCT GGTGTTCCGC AGCTACCTGG GCCTGTCCAG CCGCTGGTCG
ATCGAGGGCC GCGCCGAGCG CCGGCTGGAC TACCAGATCT GGTGCGGCCC GGCGATGGGT
GCGTTCAACG CGTGGACGGC CGGATCGTTC CTGGCCGAAC CGGGGAACCG GACCGTTAGC
CAGGTCGCGC ATAACCTGAT GGAAGGGGCG GCGGTGCTGA CCCGGGCCCA GCAGCTGCGC
ACCTTCGGGG TGGCAGTGCC GCCCGAGGCC TTCACCTACC GTCCCCGGCT CTTGCGGTGA
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| Protein sequence | MLDKAPAVPL GGWTGPITPA FGPNEVAALT HRIRDTAFVV VNPATGAHGV VTQGAAVPAE
TPGALRLVGV LPPLYPEWLG DRNFTQTHGV RFPYVAGEMA NGIATTTMVI EMARHGYLGF
FGAAGLDAGR VGAAIDELHA ALGRESTAWG SNLIHSPNEP ALEEAVAELY LTRGVRKVSA
SAYMSLTPAI VRYAYTGVRV DASGTIHRPN MVFAKVSRPE VARQFLEPAP AAMLAGLVDA
GRLTPDEARL AAGLPVAEDI TVESDSGGHT DNRPLAPLFA AIAAVRDEVV AARGYRRPVR
LGAAGGIGTP QAVAAAFALG ASYVLTGSVN QACVEAGIAA DAKAMLAAAD IADVTMAPAA
DMFELGVSLQ VLRRGTMFAS RARKLSALYR AHPSLEAIAP AELAALEKQI LGQSVADCWT
QTRAFWLERD PEQVSRAEAD PRHRMALVFR SYLGLSSRWS IEGRAERRLD YQIWCGPAMG
AFNAWTAGSF LAEPGNRTVS QVAHNLMEGA AVLTRAQQLR TFGVAVPPEA FTYRPRLLR
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