| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_4225 |
|---|
| Symbol | |
|---|
| ID | 8449851 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nakamurella multipartita DSM 44233 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013235 |
|---|
| Strand | - |
|---|
| Start bp | 4677019 |
|---|
| End bp | 4677768 |
|---|
| Gene Length | 750 bp |
|---|
| Protein Length | 249 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 645043274 |
|---|
| Product | alanine racemase domain protein |
|---|
| Protein accession | YP_003203503 |
|---|
| Protein GI | 258654347 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0325] Predicted enzyme with a TIM-barrel fold |
|---|
| TIGRFAM ID | [TIGR00044] pyridoxal phosphate enzyme, YggS family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.0670129 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.153387 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGTGCTCC CCGATCCCGA ACCCGCCGGT ACCCCGACCG GCGCCTCCGC CGGTCCGGTG
GTCGAACGGC TGGCCGAAGC CCGTCGCCGG GTGCGGGCGG CGGCCGAGGC AGCGGGTCGG
GATCCCGCCG AGGTCCGCAT CCTGCTGGCC ACCAAGACGA TGCCGCCCGA GGTGATCGCG
CAGGCCCTGG CCGCGGGGGC GACGCTGATC GGGGAGAACC GCGTCCAGGA AGTGCTGGCC
AAGGCCGACG CGTTGGCCGG GTTTCCGCAC ACCATGCATT TCATTGGCCA TCTGCAGTCC
AACAAGGTCA ATCAACTTCT GCCGCACATC CAGTGCCTGC AGACATTGGA TTCGGTCGAC
CTGATCGGCC GGTTGCAATC CCGGCTCGAA TCCGCCGCCC GGAATCTGGA TGTATTCATC
CAGGTGAATG TCTCGGGCGA GCAGACCAAA TCCGGAATCG CCCCGGCGGA CGCGCGGGAG
ATGGTCGAGG CGGTGGCGGC GGCCCCCCGA TTGCGGCTGC GCGGGTTCAT GACGATCGGG
TTGAACTCAC CCGACCGGGA CGCGATCCGC CGCGGCTACC GGGCGTTGGC CACCATCCGT
GACCGGGCCG CGGACGAGCA GTGGCCCGGA GCGCAGGACG CGGTCGAGCT GTCGATGGGG
ATGAGCGGCG ACTTCGCCGA TGCGATCGCC GAGGGCGCCA CCATCGTCCG GCTCGGCTCG
GCGGTCTTCG GGCCCCGGCC GGCCCGTTGA
|
|---|
| Protein sequence | MVLPDPEPAG TPTGASAGPV VERLAEARRR VRAAAEAAGR DPAEVRILLA TKTMPPEVIA
QALAAGATLI GENRVQEVLA KADALAGFPH TMHFIGHLQS NKVNQLLPHI QCLQTLDSVD
LIGRLQSRLE SAARNLDVFI QVNVSGEQTK SGIAPADARE MVEAVAAAPR LRLRGFMTIG
LNSPDRDAIR RGYRALATIR DRAADEQWPG AQDAVELSMG MSGDFADAIA EGATIVRLGS
AVFGPRPAR
|
|---|
| |